EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00354

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:109723480-109724170

Target genes

Number: 20
Name	Ensembl ID

HENMT1	ENSG00000162639
PRPF38B	ENSG00000134186
STXBP3	ENSG00000116266
RP11	ENSG00000228076
GPSM2	ENSG00000121957
CLCC1	ENSG00000121940
RP5	ENSG00000237349
WDR47	ENSG00000085433
RANP5	ENSG00000228054
TAF13	ENSG00000197780
TMEM167B	ENSG00000215717
SARS	ENSG00000031698
CELSR2	ENSG00000143126
PSRC1	ENSG00000134222
PSMA5	ENSG00000143106
ATXN7L2	ENSG00000162650
CYB561D1	ENSG00000174151
AMIGO1	ENSG00000181754
GNAI3	ENSG00000065135
MIR197	ENSG00000207709

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF1A	MA0046.2	chr1:109724095-109724110	GGTTAATCATTTATT	-	6.9
HNF1B	MA0153.2	chr1:109724096-109724109	GTTAATCATTTAT	+	6.27

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_31987

chr1:109722437-109724802

Gastric

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I109179

chr1

109722096

109725214

Enhancer Sequence

GAAGGCTGAG GTGGGAGGAT CACCTGAGCC TGGGAGGTAG AGGCTGTACT GAGCTGATTG 60
TGCCACTGAA CTCCAGCCTG GGTGACAGAG TGAGGCCCTG TCTCTAAAAA AAAGAAAAGA 120
AAAGAAAATA CTCCTGGTAC AGGTAACACT CATAAGTCAC GTGTATAGTA CTCTCCAATT 180
GACAAAACAT GATCTCATTT ATTACCTATA GCATAGTGAG GGAGTTATTT CTGCATTTAC 240
CGAGGAAGAA AGAGAAGCTC AGCGACACTG AGGAGCTTCA CAAAAGCATG AGCTGCTGTC 300
TGACCCGGGC CTGTGTCCAT TCAGTACTGA AACCCTCAGG AGAAATGTTT TACTTTGATA 360
AAACAGATCC CAGTGAGAAC ATTGTACTCC TGGAGGTGGG GGGATATTGA AAGGAGGAGG 420
CAGGTGCAGA AAGAGGAGTT GGAGCCCCTG AGATAAACTT TATCTTCTTA CAGTTTTGCC 480
CAGGGCCAAT CCTACTTAAG TCACTTTTCA CTCCCTCAAC CAAACACAGA GGCCCATCTT 540
CCAAACTTGA CTAGCATCCA ACTTAAACAC TTTGATGAAA CCCAAGCTGG GAAAGGAGGT 600
TGGTCTCAGC ATTTTGGTTA ATCATTTATT AAAACCACCT TAACAGGGAT CAGTGTGTAA 660
ACAGCTGAGC CATTTTTGCT AAAACCCAGA 690