EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00349

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:109583890-109584480

Target genes

Number: 22
Name	Ensembl ID

HENMT1	ENSG00000162639
PRPF38B	ENSG00000134186
STXBP3	ENSG00000116266
GPSM2	ENSG00000121957
CLCC1	ENSG00000121940
RP5	ENSG00000237349
RP11	ENSG00000244716
WDR47	ENSG00000085433
RANP5	ENSG00000228054
TAF13	ENSG00000197780
TMEM167B	ENSG00000215717
SCARNA2	ENSG00000238881
KIAA1324	ENSG00000116299
C1orf194	ENSG00000179902
SARS	ENSG00000031698
CELSR2	ENSG00000143126
PSRC1	ENSG00000134222
SORT1	ENSG00000134243
PSMA5	ENSG00000143106
CYB561D1	ENSG00000174151
GNAI3	ENSG00000065135
MIR197	ENSG00000207709

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RFX5	MA0510.2	chr1:109584418-109584434	GGTGACCATGGCAACC	+	6.19
RFX5	MA0510.2	chr1:109584418-109584434	GGTGACCATGGCAACC	-	6.33

Enhancer Sequence

CAGTTCTAAA TCGAGTCGCT GCCCCTTTCC GCGACCACAC CCAGATCCCC AAAGGCCTGC 60
TCCCATCCCG ACCATTGATG TGAGAAAGGC CAAAACCGGC CCCAGCGGGG CTCCCAGCCC 120
CGCCGCTCCC TCTCTTCCTC CGGGCCAAGG CGTGCCCAGA AAGGGACGCG AGCGCGCCCC 180
TCAGTTCTCG CACGGGCTCG ACCAAGGGGC GAGGAAGGAA GAATCGGCGC AGCGGCGAGA 240
TGGGCACGAA CCTCGCGCTC ACTTGCTGCT CAGTGCCAGG GCGAGGGGCG TCGCTCTGCC 300
CCCAGAATCC AACTGGTAAT GTGGGAAAGG TGTGGTCCAG GACCGGTGAC CTCGAACCGG 360
GGCCCAGCAG TTCGCAGATC CTCACCCCGC GATGCTGGGG CCTCACCCAC GACCCCAGCC 420
CCCTCCCAGT CGGCACCCAA GCCCACTAAA GACCCCTCTC CGGGGCCGCA AACACAGTCC 480
TCGGGGCCGC CCGGTCGGAG CCGTGTCAGG TGGTGACAGG AGGCGACGGG TGACCATGGC 540
AACCCGAGGT GTGCAGCGGA CCGACCCAGC CTCCGACTCC CGGAGTCACC 590