EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00347

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:109419850-109420210

Target genes

Number: 21
Name	Ensembl ID

RP5	ENSG00000226483
FAM102B	ENSG00000162636
HENMT1	ENSG00000162639
PRPF38B	ENSG00000134186
GPSM2	ENSG00000121957
AKNAD1	ENSG00000162641
CLCC1	ENSG00000121940
RP11	ENSG00000244716
WDR47	ENSG00000085433
RANP5	ENSG00000228054
TAF13	ENSG00000197780
TMEM167B	ENSG00000215717
SCARNA2	ENSG00000238881
KIAA1324	ENSG00000116299
C1orf194	ENSG00000179902
SARS	ENSG00000031698
CELSR2	ENSG00000143126
PSRC1	ENSG00000134222
MYBPHL	ENSG00000221986
SORT1	ENSG00000134243
PSMA5	ENSG00000143106

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr1:109419968-109419979	TCCTTTGTTTT	-	6.32
Sox3	MA0514.1	chr1:109419969-109419979	CCTTTGTTTT	+	6.02

Enhancer Sequence

GTGAGCGCTT CCGCGACGCG GGTTCTGAGG CGTTTGAGGG GCTCTCGGAG GGAGGTGACA 60
GGGAGGGGTG CGTGTGCGTG CGTGTGGGGC TTCTGTGTCC AGAGGTCTGG GGGTGACGTC 120
CTTTGTTTTG GGCAGGAGGC GGGCTGGGGG CTTGCGGGAC CTGTGGGCGC TGCGGGGACG 180
CGGCGTCGAT GCTCAAGAAA CCAGAAACTC GGCTTGAGGA GTTGCTGCTT TTTTGTCGGA 240
AGGTCTTCAA ATGAGAGTAA AGCGTTAAGA GCCTCACTCC TGAGTCTTTT TTTTTTTTTA 300
AGATAAAAAC TATACTAGAG TCCAGCGACT TCTTACCACT CTGAATGTGA GTAACAAATT 360