| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00341 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:100879810-100881410 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ALX3 | MA0634.1 | chr1:100881230-100881240 | TTTAATTAGA | - | 6.02 | | PROP1 | MA0715.1 | chr1:100880679-100880690 | TAATCAAATTA | + | 6.02 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_12173 | chr1:100878787-100881358 | CD3 | | SE_14449 | chr1:100878601-100881491 | CD4_Memory_Primary_7pool | | SE_17398 | chr1:100878358-100881228 | CD4p_CD25-_CD45RAp_Naive | | SE_17801 | chr1:100876104-100881665 | CD4p_CD25-_CD45ROp_Memory | | SE_18362 | chr1:100876290-100885491 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19892 | chr1:100879686-100881329 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_22401 | chr1:100876662-100882535 | CD8_primiary |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I100414 | chr1 | 100879727 | 100881393 |
|
Enhancer Sequence | CAGGAGTTCG AGACCAGCGT GGGCAACATA GTAGACCCCA TCTCTACTTT AAACAACAAC 60
AACAGAAAAC AAAACAAAAC AAAAAACCGC ATATTATCTT TTACAGATAA ATGTTTGGAG 120
TATAATGTAT TTGCAATTTA AAGACTTTCT ATAATTGCTA ACAGGTGTTA AGAGGATTTA 180
AACATCCAGT CCTGGTCTGT TACAGTGGAT CTGCGTCACC ATCTTCATTA CAAAGTTATG 240
GTTCCTTGCC TTGTAAACTT GATCCAATTC AGTCCTGGGT TTAAATAACA TACTTTTTTT 300
TCATTTTCTT TCTTCATTTG GAAAGTTTTA TGAAATGAAG CTCATGATAT ACCCAGAAGT 360
AAGCAGTGAA ACTCAGCACC AGGAGTTTTT AACATGAAAC CATTCAGTTT GGGAGTATGT 420
ATTATTCAAG TGATATTCTG GAGTGAGTCT GTTTTTGCGT TTTATATAAG GACTACCTTT 480
TGATGATGAA TGATAAATGT TCTACAGGGT TATATTTAGC TGCATGTTGT AACATAACAG 540
TATTTTGCTC AGCTTGCGTA AGACTAAGGG ACTGAGGTTA TTTTGGGGCG ACACATTTTC 600
TCCTTTCCCC CATTAACGTG TCCTTTTAGG TTTCTGTGTG TTAAGAACAT TGGCTTGGTG 660
TTTCCTTTGT TTGCTTTATA AGGGGTTGGA CTAGTTTACT GTCACACAAC CAGCTCAGTG 720
AGGTCTATGC TGGTACATGA ACTCACCTCA GGCAGAAGAG AAGCATTGTG TCACTGAGAC 780
AATGCTAGCA AGAGATGTGC ATTTGTGCTG GCTGTAGCTG TCAGTTCTGG AAGGATATCT 840
TTTTAGGCTG ATTATGAAAA TTCTGGTTGT AATCAAATTA GATGGGAAGA CACACATGGC 900
TAATATTGTC TGCCATTCTC CCTAAATTGC CCATCAAAAA GCTCCCACTG GTTTCACTCT 960
AATTATACCC ATGAGAGGGG TGAGAGAGTA TTTCTATTCT AAACGAATTG TCAAATAAAT 1020
AAAGTCTGCT GTTTGTTGAC TGTATGTTAA ATCCCAGCTT CAAATTAAAC TGTAAAGAGA 1080
TGTCACATGA GGGTATTTCA GAGCAAACAG CACCTCAAAC AAAAAACATA CTCATTTCTA 1140
GACCTCATTC TCATGAGGAT TCAAATACTG AAAATTGTTA AGTATTTTTA GGGTAGAAAT 1200
AAGTGATGTC TATAGAGACC TGATGTCAGG TTCTGCTTAA CTTCTATGAT TAGCCTTGCC 1260
TCCATATTTG TTAAGCAGGT ATATTGTCTT ATGCTTTGCT GACTTCATAA TCTGTGATTT 1320
ATAATGGACT CAAAACTTGA AGAACAGGAA GAATGACTTT ATTTTACAAC ATGTTCAACC 1380
AAAGACTGTA GGAAACAAAA GACATTCATT CTTACTCTGT TTTAATTAGA CTATTTAGCA 1440
TGATAGATTT AAAATAGACT GAATATAATA CAAGTTTTAA ATACAGTTGT GTTTCTGATT 1500
TGTAATCAGA CTGACTTTCC TAATTCATAT GTGATTAACA TTGAATATTT CTATTTCCAC 1560
AAGCAATTAG AACAAAGTGG AATTGTTTAT GCATTTGAGA 1600
|
