| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00326 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:94049720-94051500 |
Target genes | |
SNPs | | Number: 3 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gfi1b | MA0483.1 | chr1:94050147-94050158 | AAATCTCAGCA | + | 6.32 | | KLF4 | MA0039.3 | chr1:94050705-94050716 | GCAGGGTGTGG | - | 6.62 | | Mecom | MA0029.1 | chr1:94050605-94050619 | AAGATAAGACAAGA | + | 6.59 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_00285 | chr1:94048823-94052046 | Adipose_Nuclei | | SE_24467 | chr1:94047354-94051276 | Colon_Crypt_2 | | SE_29507 | chr1:94046603-94051815 | Fetal_Intestine_Large | | SE_30459 | chr1:94049165-94051088 | Fetal_Muscle | | SE_31653 | chr1:94046979-94051493 | Gastric | | SE_36105 | chr1:94049690-94051592 | HMEC | | SE_45907 | chr1:94049048-94051466 | Osteoblasts | | SE_50800 | chr1:94047141-94051486 | Sigmoid_Colon | | SE_51412 | chr1:94049076-94051461 | Skeletal_Muscle | | SE_57128 | chr1:94050005-94050630 | VACO_400 | | SE_57128 | chr1:94050911-94051327 | VACO_400 | | SE_65777 | chr1:94049616-94050970 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 94050231 | 94051222 | | chr1 | 94050618 | 94051200 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I093578 | chr1 | 94043818 | 94052134 |
|
Enhancer Sequence | GTAAAATAAA ACTTTTAGGC AATGCCATGG GAACTTAAAC AAAAACAAAA AAAAAGAAAA 60
CTGCTCAGAA CGAGAGTGCT ACAGCATACC CTAAAAGTAA AGGAATGACC GCTGGAGAAA 120
CAAATTACTG ATGGGACGAT TAATATATGA CTGTGTTGTG TACTCCATCC CCCTGTCCCC 180
ATGACCAATG CAGCAGCTGA GTCCTAGGAT GCCTCCTCTG GGCTGTTCCA TCCTGTTGAA 240
CAGAGTAGGG TAAAAGTTTT ACGATACTCC CGGGAAAATC TGATGAACTG GAATGTGTAC 300
TTTTAACAGA GCCTAAAATT ACTTACAGGC CCAGAGGGAA TGGCTTGCCT AACTAACATG 360
CATTTTCCAC ATGCTCCATA GTGTTGCAGT TAGGAAGGAA GCTGTGGGGA AACTTCCATT 420
TTGGTGCAAA TCTCAGCATC CCCCAAATAA CCTGCAGGAC TGCCTGGGGA GGCTGCCATC 480
CCCAACCTCC TGGCTGCTCT CGGGGGACCC CCACACAGCC TCCTCCTGCT GAGCTGGGAA 540
AAGGCACCGG CACGGTCACC AAGCAGCAGT TGGGAGGCAC ACTGTGTAAC CACACAAGGA 600
AAAGGTGGAA GGTAACTTTC AACACACTCG CTGTTATTCC TTCTGTCCCT TTCCAATTCA 660
GACTGGGAAT TTCTCCAGCA CCAAGCACCA GAATCTCCCT AGCTAGAGAC AGAGGCACTG 720
CACCAGCCAA GTTGTTATGA ACTTTAATTG GCCTTCCCAT AAGCATAAAA CATTGTTATG 780
TTACAGAAAT CACGAAGTTC TTTCCTACCT TTACAAGCAC CAAAGAAAAA ACAAATCAAA 840
AAACCCCCAA ACTCCAAGGA ACAGAGAAAT TCCAGCAACC TTTCGAAGAT AAGACAAGAC 900
CGAGGGCAAA TTACAAAAGG AAATATCTCC CGAGAAGTGA TATTTAAGCA GTGACCACTG 960
CGGCTGGACT CCAGGGGCCA GAACGGCAGG GTGTGGAATG CAACCTGCCT GTGAGCACAC 1020
ACCTTCGCCC AGGGCAGGCC ACCAGCCAGC CAACTAGCAG GCCCGACGTC AGGGCAGGTG 1080
GCACCTGGCC AGAGCTGCAT AAGGGAGCCA CTGAAGGACA CTGGGGCAGG GCAGCAGGCC 1140
ATGAGCCATC TTTTCCCCTC CTCCCACTTA AACATTTCTG GGCGTGCTGC GTGTACAAAG 1200
TGGTGACAAG TTCTAGGAGG ATCTGCATTC CAAAGGGCAA ACAGAAAAGT GGCTCTATTA 1260
GGCCTGACTT GTTGACTTAA GAGACTTAGT CTTTTTTTCA TTTCTTATCT TAAAAAGTTT 1320
TTAAACCAGG ATCATTCAGG GCCAACTAGG AGGCCTTCCC TGCAGCAGTG GTTCTGTTAT 1380
CCTGCCGAAT ACACTCCCAC TCTGTGCATG ACATTAATTC CCTGCTTCGA CCATTCAGCA 1440
GCCTATCCTT CCCAAAGGAA ACAGAAGAAA AGGTACCCCT TCTAACACTG TAAGGCATCT 1500
CAAGTCCAAT CCTATTACTA TGAAAAGGAG GATTTCTAAA TATCAGGTCT TGCCTCCCTC 1560
CTTGCAATTG CCCTGAGTTT TTTTGTTTGT TTTGAGACAG GCTCTCGCTC TGTTGCCCAG 1620
GCTGGAGTGA AGTGGCATGG TCATGGCTCA CTGCAGCTTC AACCTCCCAG GCTCAAGCAA 1680
TCCTCCCACC TCAGCCTCTC GAGTAGCTGG GACCACAGGC ACACACCACC ATGCCCAGCT 1740
AATTTTTATA TTTAAAAAAT TTTGTGCATA CATAGTAGGT 1780
|
