| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00219 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:44015440-44016850 |
Target genes | | Number: 15 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF5 | MA0599.1 | chr1:44016018-44016028 | GCCCCGCCCC | + | 6.02 | | KLF5 | MA0599.1 | chr1:44015762-44015772 | GGGGCGGGGC | - | 6.02 | | SP1 | MA0079.4 | chr1:44015760-44015775 | GAGGGGCGGGGCCTG | - | 6.22 |
|
| | Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
| SE_00616 | chr1:44009256-44025211 | Adipose_Nuclei | | SE_05040 | chr1:44015834-44021066 | Brain_Cingulate_Gyrus | | SE_05962 | chr1:44000439-44020958 | Brain_Hippocampus_Middle | | SE_07193 | chr1:44016119-44020709 | Brain_Hippocampus_Middle_150 | | SE_08033 | chr1:44015878-44020741 | Brain_Inferior_Temporal_Lobe | | SE_23218 | chr1:44005985-44017477 | Colon_Crypt_1 | | SE_23829 | chr1:44015459-44017409 | Colon_Crypt_2 | | SE_24870 | chr1:44012836-44017627 | Colon_Crypt_3 | | SE_26649 | chr1:44010798-44020559 | Esophagus | | SE_27645 | chr1:43995619-44017587 | Fetal_Intestine | | SE_28595 | chr1:44005404-44017604 | Fetal_Intestine_Large | | SE_31538 | chr1:44004919-44019003 | Gastric | | SE_41575 | chr1:44015364-44020400 | LNCaP | | SE_47657 | chr1:44015425-44018793 | Pancreas | | SE_50363 | chr1:44005822-44020588 | Sigmoid_Colon | | SE_52524 | chr1:44004832-44019377 | Small_Intestine | | SE_56987 | chr1:44014752-44017377 | VACO_400 | | SE_65452 | chr1:44004903-44018198 | Pancreatic_islets | | SE_69138 | chr1:44014239-44017340 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 44015731 | 44016125 | | chr1 | 44016660 | 44016751 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I043539 | chr1 | 44005459 | 44020850 |
|
Enhancer Sequence | GCTTGAGCCT AGGAGGTGGA GGCGGAGGTT ACAGTGAGCT GAGATTGTGC CACTTGTACT 60
CCAACCTGGG TGACAAAGTG AGACCCCCCT CTCAAAAAAA AAAAAGACTA AAGAAAAGTG 120
AGCCTGAGAG CTTAGGAGGA GCACATTTCA GAGGGGAACG GAGAGAGGAA CATCAGGCCC 180
GTTGGTAGCT GAGGAGAGGT GCGGTTAGAT CTGTGCTCCC CAAAGATCCT CTGCTGAACA 240
TAAGGGGCAA CGCCTTGTCT CCTGTGCTGT GTCCTGCGGG TGGAGGTGGA TTGGAGGGAA 300
GCGGAGGGCG AGGCCTGGTT GAGGGGCGGG GCCTGCCTGT CTGGTCCCCC GGGCTGCCTT 360
GGGCCAGCTT GGCCTAGTCT GTTGGGTGGG CGGGCAGGGT GCAGGCTCCT CTCCAGCCTC 420
CAAGGGAGGG GAGTTGTTCT GCCTCCTCGA TAGCCCCAGG CCTTGGGCAC AGCCCAGCCT 480
CCCACGGCTC TTGGGCCCTC CTCCTTCCAG GCCGCCGGTG ACCCACACCT GGCTCTCCTC 540
CCCGGCGTCT CCTCTCCGCT TCTTTGTTTG GAGCGGAGGC CCCGCCCCAC CCCGCCCCCA 600
GGCGCACTCG CCCGGCCATT CCGGTTCAGC CGGTTCCAGC CCCCAGTTTC TGCCGCTGCA 660
GGTCCCGGCA GGAGCTGGAG GGGCACTTTC TCCCTGGGTT TCTCTTCCCT GGTGCAGCAG 720
GGGCCGCGGT CCTCATCCTC CTGGTTCCTC AGTTCGGTCC TTCTTTCATT CTCCACCCCT 780
GGGTGCCAGG AACTGGGTCA GACACTGGGA CAGGAATCCA GACAGGCATG CTATCTGCCC 840
TGCCCAGGGT TATGTTCTAG GAGGGGAAGC AGCCATTAAT CAAACACCAA AAATGTGGAA 900
AAGTAATAAT CTCACACGTG TGCATAATAA ACTGTGAGTG AAAGTTATAA GCTCGGCAGG 960
TAGGTAATAA GCTAGGAGCA GTGCTGTGGG AGGCAAGGGA GTTACCCGGG AGTTTCAAAC 1020
TAGGAACTGA GCTCATAGGT TGGGGGCAGG GGGACTGGAG AAGGCAGTGA TACTTAAATG 1080
GAGAGCAGAA GGATGAATGG AAGTTAGAGT GTATGGCGGA GGTTGGCAGA AGCAGCAGCT 1140
TATGCAAAGG CCCTGTGGCT GCAGGGAACA TGACGTTGCT CTTTAGAGGA GCCAAAGCTG 1200
GGGCTCTGGG GAGAGCAGCT GGGTCAGACC CCGCGGCTTT GTCTGCCATA ACAGGTGTTT 1260
GGAGAGTGAT TCGGCAGGTC TTTGGAGGGT TTTGATAGGG CGGGGTGTCG GGGGAGGCTG 1320
TCAGCTCACT CTGGACACTG AGTAGAGAAC AGACGGGAGG CGTGGGGCAG GCCTGGAGGC 1380
AGGGGCTTCC GCGTGTTAGG CCAGTGGAGT 1410
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