| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00214 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:43813870-43814510 |
Target genes | | Number: 17 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr1:43813971-43813982 | TTTTATTGCTT | - | 6.32 | | mix-a | MA0621.1 | chr1:43813904-43813915 | ACTAATTAATT | - | 6.62 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_03360 | chr1:43813758-43814605 | Brain_Angular_Gyrus | | SE_23264 | chr1:43813602-43815872 | Colon_Crypt_1 | | SE_23848 | chr1:43813941-43815771 | Colon_Crypt_2 | | SE_24762 | chr1:43813843-43816295 | Colon_Crypt_3 | | SE_31866 | chr1:43813587-43816440 | Gastric | | SE_34471 | chr1:43813503-43816544 | HCT-116 | | SE_35010 | chr1:43813554-43816263 | HeLa | | SE_57439 | chr1:43813955-43815756 | VACO_503 | | SE_65856 | chr1:43813657-43816001 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I043347 | chr1 | 43813613 | 43816407 |
|
Enhancer Sequence | TTAAATGCTT CTCTGGACTT CCGTGGTGCC TTGCACTAAT TAATTGTTGT GATTATTTAC 60
CTGTTTGGAT GTCTTTCTCA TTAGATATGT AAGAGACGGT GTTTTATTGC TTTCTCCCCA 120
GTGCCTAACC CAATGTTTGG AGTATCACAC AGTTCATAAA TGTTTGCTGC CTTCCTGCTT 180
GTACACATGA TGCTTGTACC CCAGCGCCTA ACGCAAATCT GGCATCCTCT GCAGCATGAG 240
TATTATTTGT GGCATGGTCT GTGTGGCTCT GAATATATCT GTTTCTGGGG GTGTCCATCG 300
CCCGACCTGG AGTTGTGAGA ACACCCGGTA GGGTGTGCGT GTACCGGGAT CCCTGCCGAG 360
GGTGTACCTG GGTGTTGGTG TTAGGATACG TAGCTCTCTG AGGTGAGGTC TGTGTCTCAG 420
GAGGTGGGCC TGGCACGTTT CTCTCGGGCA GAGCGTGATC CCGTTAGGGA GAGGCTCTCG 480
GTTAGGGCGC TCTATCCTGT TGCTGGGAAG CGTGTTTTCT GCCGGTGGGG CTCTTTGTGG 540
GAATCTCCGA CCGCCTGGGG ATTCGGAGCT GCAGGATTTG GGTCAAACAG ACGCTGGGCT 600
ATCGAAGCCC CGACGCCGGG CCACCGCACG CTTCTTTGCT 640
|
