| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00209 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:43397400-43398290 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr1:43398223-43398243 | ACCCAACCCATCCCAACACC | + | 6.09 |
|
| | Number of super-enhancer constituents: 42 | ID | Coordinate | Tissue/cell |
| SE_01795 | chr1:43397398-43398157 | Aorta | | SE_05390 | chr1:43397289-43399585 | Brain_Cingulate_Gyrus | | SE_06192 | chr1:43395065-43405505 | Brain_Hippocampus_Middle | | SE_07319 | chr1:43396705-43398566 | Brain_Hippocampus_Middle_150 | | SE_08269 | chr1:43397488-43399602 | Brain_Inferior_Temporal_Lobe | | SE_10377 | chr1:43396392-43405534 | CD19_Primary | | SE_11009 | chr1:43387831-43425728 | CD20 | | SE_12470 | chr1:43397348-43399808 | CD3 | | SE_12535 | chr1:43397880-43398025 | CD34_adult | | SE_13825 | chr1:43396778-43399313 | CD34_Primary_RO01536 | | SE_14471 | chr1:43395753-43414527 | CD4_Memory_Primary_7pool | | SE_19657 | chr1:43396427-43405202 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20345 | chr1:43395492-43405550 | CD56 | | SE_20799 | chr1:43396312-43405729 | CD8_Memory_7pool | | SE_22754 | chr1:43395674-43405513 | CD8_primiary | | SE_23189 | chr1:43397346-43399720 | Colon_Crypt_1 | | SE_23904 | chr1:43397399-43399265 | Colon_Crypt_2 | | SE_25177 | chr1:43396926-43398787 | Colon_Crypt_3 | | SE_26580 | chr1:43395721-43413249 | Esophagus | | SE_29267 | chr1:43397108-43398616 | Fetal_Intestine_Large | | SE_31882 | chr1:43396701-43399114 | Gastric | | SE_33837 | chr1:43396695-43400408 | HCC1954 | | SE_34353 | chr1:43395339-43412997 | HCT-116 | | SE_36013 | chr1:43398145-43399517 | HMEC | | SE_37191 | chr1:43393285-43398371 | HSMMtube | | SE_39883 | chr1:43397369-43405479 | K562 | | SE_41620 | chr1:43397520-43399349 | LNCaP | | SE_42796 | chr1:43396336-43399368 | Lung | | SE_50202 | chr1:43396219-43406255 | Sigmoid_Colon | | SE_54088 | chr1:43396020-43399837 | Spleen | | SE_55340 | chr1:43396132-43399459 | Thymus | | SE_55821 | chr1:43396763-43399673 | u87 | | SE_57045 | chr1:43396858-43405413 | VACO_400 | | SE_57417 | chr1:43397518-43398729 | VACO_503 | | SE_58269 | chr1:43397518-43398137 | VACO_9m | | SE_58561 | chr1:43388242-43430420 | Ly1 | | SE_60624 | chr1:43388552-43428820 | DHL6 | | SE_62392 | chr1:43388423-43425814 | Tonsil | | SE_64094 | chr1:43397486-43398043 | HSMM | | SE_64340 | chr1:43397259-43405516 | NHEK | | SE_67781 | chr1:43396763-43399673 | u87 | | SE_68708 | chr1:43393050-43401454 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I042929 | chr1 | 43395541 | 43414526 |
|
Enhancer Sequence | AAGGCAGAAT TGCTTAAACC CAGGACACGG AGTTTGCAGT GAGCCAAGAC TGTGCCACTG 60
CACTTCAGCC TGAGTGACAG AGTGAGACTC TATGTCTCAA AAAAAAAAAA AAAAAAAGAG 120
AAATACAGAA GGAAAAGGGT CTTCCCACTT GCCCCTTTTC TCCTCACCAT GTCTCAAAGC 180
CCCAGGGGCC CATCTCCTGC CATCAGGCCC TCCCCCCAAC CCCTTGCTGG GGAGGAAGCA 240
GGGCTTGACA GACAGGTTCC GCCATCCAGG AAGTACAGAC TCCCTGACCG CACTGAGGGC 300
CTGGTGTGAC AAACTCACAC ATGTCACCCT TCAGAAGTGC TTGAAAGACT CACGCTGTGG 360
CTTTCTGTTC CCCAGGCCTA GCTCCCTTGT GTCTGGCCTG CGAGCACCCC CTTGAAGGAC 420
CCACGGCCTC CTCCCCTCTC CCAAGGGCCC AGCTAGGAGG TATGGGGAAA GGTTCCACAC 480
AAGGAAGCAG TTCCAGGAAC TGGAAACGCC CGTCCTAGGG CAGCCCTGCC CACCAGCCCT 540
GCCCCCACCC TGGCCAGCTC CCACGGATGT GGTAGGCAGG CAGCACCCGT TCTGCCTGAG 600
CACACTCACC ACACTCTCAG TGCCATGGGA CTGGCCAGAC CCACCCAGCC ACACGTATAG 660
CAGAGTGCAG GCCCTAGTTA CCCAGAAACG GCTTCTTATG CACGTATACC ATCACACACA 720
CATACCCGTG CTCATAGAAT CTAAATATTC CTGCTTTAGC CAGTCACAAA CTCACATGCC 780
CCTCATCCCC TACCACTTAC AGCTCAAACT CAATTCCATG TGAACCCAAC CCATCCCAAC 840
ACCCCTCCGT GTGTGTGCAT GCCACAGGTT CATGCACACA CAGCGGTATG 890
|
