EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00173

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:36672720-36673540

Target genes

Number: 20
Name	Ensembl ID

NCDN	ENSG00000020129
KIAA0319L	ENSG00000142687
PSMB2	ENSG00000126067
C1orf216	ENSG00000142686
CLSPN	ENSG00000092853
EIF2C4	ENSG00000134698
EIF2C1	ENSG00000092847
EIF2C3	ENSG00000126070
RP4	ENSG00000242815
ADPRHL2	ENSG00000116863
COL8A2	ENSG00000171812
TRAPPC3	ENSG00000054116
MAP7D1	ENSG00000116871
THRAP3	ENSG00000054118
RP11	ENSG00000231849
STK40	ENSG00000196182
LSM10	ENSG00000181817
SNORA63	ENSG00000201448
OSCP1	ENSG00000116885
MRPS15	ENSG00000116898

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_37181	chr1:36672340-36674034	HSMMtube
SE_42156	chr1:36672671-36673482	Lung
SE_48599	chr1:36672542-36673499	Right_Atrium
SE_54589	chr1:36672410-36673729	Stomach_Smooth_Muscle
SE_65351	chr1:36672394-36674231	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I036207

chr1

36672767

36673401

Enhancer Sequence

TTATCCAGTC TTGAATATTT AGAGAAAGAC TCGCTGGTCT TCAGTCAATT CTATCCTTTT 60
GGATCGGTTT GGCTTAGCCA TAGAGGCCTG TTGCTGTGAC TCCCAAGACC ACTTCGTGCT 120
CCCACATCCG TCCCCTCCCC ACAAACAGCA ACTTTGTGCC TAGCAGAGGT CCTGGGAGAT 180
CTGAATGGGA GTGGTGCAAA GTTGCTATTA TTCAAGAAAA GACAACAGCA GCATCAAAGA 240
CACCCAGACC CATGTTCACT TTCTCTGGCT TGGGAAGACT CATCAAGGCT TCCTGATGGG 300
TCCCGCTTCC GCCCCTCCCA AGCTGGGAGC CTTGTGCTGT GGAGTAACCC AGCATAGTAA 360
CCGGCTCCTG GAGCTGGGCC TTGGTAAACA AGAGCCCTGG CTGGGGGATG TCTTTTGGTG 420
CCTGGCAACC TCTGCTTTTG GCCTGGCAAT CCCAAAGCCT GTAACAACCG CAGTCCCCAC 480
CCCAGGCAGG AAGGAGTAAA CACTCGCAGC AAGGAGACCA AAATGCAAAT TACAACCTCA 540
AGACGTTTCT CTGCTGCATT GACAGACCAG GCTAGTAGCA ACAACCACCT GAGGCTCTGA 600
ACTAAACAAA AAGAGGAGTT CAGGCTAGGA AAGGAGACAT TCTGGCTAGA CTTCAAGAAA 660
GACTGAAGAC TTTTTTTATT TTTATTTTTT TGAGACAGAG TCTCACTCTG TCGCCCAGGT 720
TGGAGTGCCG TGGCACGATC TTGGCTCACT GCAACCTCAG CCTCCCGGGT TCAAGCGATT 780
CTCCTGCCTC AGCCTCCTGA CTAGCTGGGA CTACAGGCAC 820