| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00055 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:10783920-10784960 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF4G | MA0484.1 | chr1:10784249-10784264 | TGAGAGCAAAGGCCA | + | 6.17 | | MEF2A | MA0052.3 | chr1:10784279-10784291 | GCTATAAATAGC | + | 6.32 | | MEF2B | MA0660.1 | chr1:10784279-10784291 | GCTATAAATAGC | + | 7.22 | | MYCN | MA0104.4 | chr1:10784259-10784271 | GGCCACGTGGTC | + | 6.52 | | MYCN | MA0104.4 | chr1:10784259-10784271 | GGCCACGTGGTC | - | 6.52 | | ZNF263 | MA0528.1 | chr1:10784826-10784847 | GGAAGAGGAGGCAGAGGAAGG | + | 6.37 |
|
| | Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
| SE_23090 | chr1:10783548-10785045 | Colon_Crypt_1 | | SE_24724 | chr1:10782796-10784169 | Colon_Crypt_3 | | SE_24724 | chr1:10784444-10785540 | Colon_Crypt_3 | | SE_26723 | chr1:10782546-10784344 | Esophagus | | SE_26723 | chr1:10784380-10784964 | Esophagus | | SE_31374 | chr1:10781495-10788546 | Gastric | | SE_40607 | chr1:10772324-10790002 | Left_Ventricle | | SE_41555 | chr1:10781532-10785534 | LNCaP | | SE_42099 | chr1:10779231-10788633 | Lung | | SE_47486 | chr1:10783767-10784248 | Pancreas | | SE_47486 | chr1:10784380-10785439 | Pancreas | | SE_48119 | chr1:10782759-10788636 | Psoas_Muscle | | SE_48591 | chr1:10773352-10788686 | Right_Atrium | | SE_49447 | chr1:10781476-10784257 | Right_Ventricle | | SE_49447 | chr1:10784422-10785425 | Right_Ventricle | | SE_54510 | chr1:10783384-10788141 | Stomach_Smooth_Muscle | | SE_65281 | chr1:10783274-10785800 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I010722 | chr1 | 10782912 | 10789847 |
|
Enhancer Sequence | TGGCCTCCCC AGTTCAGCAC TGCCTGGGTC ATGTGCCCCA GCCCCAGAGC CCACCTTCTC 60
CTCTTCTTTG GGGGTTCTTC CCGAGTCCAA ACCATGCCAG CAGGGGTTCA ACCCTAAACT 120
CACACCCAAC CGCTAGCACC TGCCCCAGCC TCCCATATCA CTTTGGATTC CTGGTGAGGA 180
CAAGTCCAGT TTTCCAAACC GACCTTGGAG CTCTTTGACC ACAGCACACT TTGGGAGAAG 240
GTGGAAGAGT CCTCCCCATC TTTGCCAAAA GAGGTGTCAG GCTAACGTTA CACCAGCTTT 300
AAAAATACCC CAGCACACGA TCCACAGGGT GAGAGCAAAG GCCACGTGGT CAGAGCCGGG 360
CTATAAATAG CCAGCAAATC ATTTCCCAGA GCCACGGCCC CCTCCCCAGC ACCAAGAACC 420
TTTCTGAGGA AATCAAAGTG AACGCAACTG TTACCAAGTC ACTACTAAAA TATTTACCAG 480
CCTGGCGAAG TGCCGAAGGT GCTTGGCACC GAGTGTTTGC TTATTTACAA GGCTGTTTTA 540
AAGGGTAGAA AGCAAAATAA GGTAACCTGA GCTATTAAAC CCGGGGGCCA GGTGGTACCT 600
ACCAGCTGTC AGCCACCCCA GGCATGTCGG GAGCTAGAAC AGTCCTGGTG GAGATTCCCT 660
TGAAATGGGT CAGGAAAGCA GAGAGAGGCT TTGGAGCCCA GGAATCACCT AGCCCTCAGG 720
GGTAGGGGCT CAGGGAGTGG GAGCAGAGAG TGTTAGAGGT TAGAGAAGCA CTTCTCCCCC 780
AGCCAAAGCA AGCAGGGCCT AGCACGAGCT CCAAGGTTGC CCCTGGTCTT CGCTCAGAGG 840
GGCACCCCAA GGGCACTGCC CAGCCAGAGG CAGGGGCAAG GGCCCTGGGA GGGAGAGGCA 900
AGGCGGGGAA GAGGAGGCAG AGGAAGGCAG GTGGGGGGCT GGCTGGGAGC CTCGGAGGAT 960
GACATAAGGG GGACACAGCC AACCTGGGGA AGAGAAGGTG CTCAACTTCT CTCTTTCTCC 1020
TCTTTCTCTG AAGTTTCCTT 1040
|
