| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00053 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:10712460-10713350 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXP1 | MA0481.2 | chr1:10712607-10712619 | AGGTAAACAGAA | + | 6.14 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_31374 | chr1:10711440-10717991 | Gastric | | SE_41555 | chr1:10711931-10712664 | LNCaP | | SE_41555 | chr1:10712730-10714328 | LNCaP | | SE_42099 | chr1:10711394-10714403 | Lung | | SE_54510 | chr1:10711383-10754578 | Stomach_Smooth_Muscle |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I010651 | chr1 | 10711932 | 10712664 | | GH01I010652 | chr1 | 10712774 | 10713906 |
|
Enhancer Sequence | CACCCGGCTT GGAGCCTGGC TCTCAGCAAG CATCAGTGGT TGTTGAATGA ATAAGTGAAA 60
TGAGCCACAT CCCAGATGTG AACGGAACTC TCCTCAAGGA TTCAACAAAT AGGAACTACC 120
CAGAGCAGGG AAACTGGGAG AGGAGTGAGG TAAACAGAAA ACACCCTCAC CCCAATCCAG 180
AGAAAAATGG AGGGAAATTT TTTTAAAATG GATATTTATG AAATTATAGG AAGGCAGGAA 240
AGAGAACTGC GCCCCTCAGT GAACCAGCGT GAAGAAGGAA GATGCAACTC CGGGGCTCTG 300
GCCCTTTTCT GTCTGACGTG GCAGTCCCTG GCCAAGTGTG GTTGTTTAAA GTGACAATCC 360
CGCTTCCCAA TCACAGACCC AGCTTCAAGC ACCAACAGTC ACACGTGGCC AGTGGCTGCC 420
AAGTCAAACA CTGCAGAATA GAAGGCTTCC AAGGCCTGGA AAGTCCTACT GCAATGGCAC 480
TCATGGAGGA GGGAGCCTGG GAAGGGCGTC CCTGGGCCTG GAGGTGTCCA GGTGTGAGGT 540
GCAGCCCCAC TACCGCTGGG CTGGACGCAG GCCCTGCTCC AGGTCAGCTG GAGGAAACGC 600
TCGGCACGCC AGGGGCCCTG GGCCTGCTCT TATCAGGGTG GACTTGGGAT GTGGGAGGGT 660
GAGCAGACAG GGAGGGGGGA CCTGCAGTGG CCCCAGGGAT GCAGGGCAGC CGAGGAGGCA 720
GGGACCATCG CCCCCAGCTC ACAGATGGGG AAACAGAAGC ATGGCCCCCC TACTGTGGGG 780
AGCCAGAACC AGGGGCCCCA CATAGAAACC AACAGGATGG GGGCGAAGAT CAGGCAAAGA 840
GGGGGTGCTG GCAAGCAGGG GCCACACGGA CACTTCTTCC AAACACCCCC 890
|
