EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00031

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:6187550-6188100

Target genes

Number: 10
Name	Ensembl ID

KCNAB2	ENSG00000069424
CHD5	ENSG00000116254
RNF207	ENSG00000158286
RP1	ENSG00000226944
RPL22	ENSG00000116251
ICMT	ENSG00000116237
LINC00337	ENSG00000225077
HES3	ENSG00000173673
GPR153	ENSG00000158292
ACOT7	ENSG00000097021

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:6188045-6188056	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:6188046-6188056	GGGGCGGGGC	-	6.02
MAX	MA0058.3	chr1:6187902-6187912	AGCACGTGGT	-	6.02
SP2	MA0516.2	chr1:6188043-6188060	TGGGGGGCGGGGCTGCG	-	6.09

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I006127

chr1

6187438

6189477

Enhancer Sequence

AAAAAAAAAA AGAAAATTGT GGGCCGTCCT GGAACGTTGG CGGTCCAGGT GCAGGGCCGA 60
GATGCAGGCC CTGAGGAAGG GGCGGGAGGG TGCAGCTGGG TAGGGACTGA AACCAGACCC 120
CGGGGACAGG GCTCTGTGCA ACGGGGTGGC AGATCAGCTT GCACTTCAGA GAGTGGGGAA 180
GCTGGACTGG AGCCGGGATG ACGCCACGGA GCAGGCGGCT GATGTGTGCA AGGGCAGTGG 240
CCGGCCCATG TGGCTGTACT GCCCTCAGCG CTGCCTCCGT CCCTTCCCTC ACTGTTGTGT 300
CTCTAGTCCT GAGCCCGCGG GTGGAGCGAC AGGGCCGCCC TGCAGAGGCC GGAGCACGTG 360
GTTGGAGGGC GGAGCACACG CTGGAGTGCG GGGCACAGCA GGGAGGGCGG GGCTGCGGCT 420
GGAGGGCGGG GTCACAGCTT GGAGGGCTGG CTGCGGCGGG AGGGCGGGGT CACAGTGGAA 480
GGCGTGGACA CAGTGGGGGG CGGGGCTGCG GATGGAGGGC GGGGCTGCGG ATGGAGGGCG 540
GGCCGGGGAC 550