Tag | Content |
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EnhancerAtlas ID | HS119-00459 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-1F5 |
Coordinate | chr3:39182180-39183340 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EBF1 | MA0154.3 | chr3:39182897-39182911 | AGTCCCCAGGGACC | + | 6.38 | KLF4 | MA0039.3 | chr3:39182767-39182778 | GCAGGGTGTGG | - | 6.62 | Klf1 | MA0493.1 | chr3:39182769-39182780 | AGGGTGTGGCC | - | 6.32 |
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| Number of super-enhancer constituents: 30 | ID | Coordinate | Tissue/cell |
SE_00534 | chr3:39181928-39184389 | Adipose_Nuclei | SE_01089 | chr3:39182441-39184126 | Adrenal_Gland | SE_01899 | chr3:39182501-39184485 | Aorta | SE_03014 | chr3:39182774-39183356 | Bladder | SE_04302 | chr3:39182452-39183421 | Brain_Anterior_Caudate | SE_06185 | chr3:39181726-39183710 | Brain_Hippocampus_Middle | SE_08206 | chr3:39181481-39183798 | Brain_Inferior_Temporal_Lobe | SE_10149 | chr3:39181954-39183861 | CD14 | SE_18872 | chr3:39179302-39184071 | CD4p_CD25-_Il17-_PMAstim_Th | SE_23377 | chr3:39181503-39185291 | Colon_Crypt_1 | SE_23920 | chr3:39181770-39184419 | Colon_Crypt_2 | SE_24797 | chr3:39181518-39186053 | Colon_Crypt_3 | SE_26868 | chr3:39181663-39185588 | Esophagus | SE_31506 | chr3:39182315-39185630 | Gastric | SE_36770 | chr3:39181772-39183511 | HMEC | SE_37186 | chr3:39182746-39186036 | HSMMtube | SE_40691 | chr3:39182268-39184390 | Left_Ventricle | SE_41653 | chr3:39181816-39186110 | LNCaP | SE_42157 | chr3:39181812-39186008 | Lung | SE_47666 | chr3:39182584-39185171 | Pancreas | SE_48424 | chr3:39181634-39183449 | Psoas_Muscle | SE_49175 | chr3:39181735-39184371 | Right_Atrium | SE_50193 | chr3:39181855-39185409 | Sigmoid_Colon | SE_51558 | chr3:39181581-39185410 | Skeletal_Muscle | SE_52456 | chr3:39181841-39185347 | Small_Intestine | SE_53827 | chr3:39182382-39185451 | Spleen | SE_55403 | chr3:39182409-39183268 | Thymus | SE_58072 | chr3:39182812-39184212 | VACO_9m | SE_62971 | chr3:39182508-39196204 | Tonsil | SE_65440 | chr3:39182332-39186025 | Pancreatic_islets |
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| Number: 1 | ID | Chromosome | Start | End |
GH03I039140 | chr3 | 39181766 | 39185178 |
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Enhancer Sequence | TAGTTAAGCT GGTTACAGGG ACATACTGCC GCACCATAGG CCAGACTCCA AACTATGAGT 60 CCTCTAATGG CACTGATATG GCCATGTGGT CATGACCATG CATGTCCAGA GGCAAGAGAC 120 AGATACCTGA AGGGTGACAG GACAGGCAAA AAAAGGATTA AACATTCAGA GAAAGAATGG 180 CAGAAACATG AAAATCAATG CAAGTTGCAA ACATACACAG GACTTGCATG TTCCAGGCAC 240 TCTTTAAGGG CTTTGTAAAT ATGAAATAAA CAAGTTTATG AGGTGAGTAG TGTTACTGTT 300 TGCATGTAGT ATTGAGGACA CCCAGGCACA GAGGGAGTAA TTTGCACAAA TCACCTCACT 360 AGGTAGCAGA AAATCTGAGA TTCAAGCCCA GCATTCTGGC TCTGTGCTCT TACCAGTTAA 420 GCCAAAGAGA TGAGTGAGCC CAGTACAGAC CAAGGCAGAG AATTAGAGCA AGGAGACCCA 480 AATCAGTTCT CCTCTGGCGG TTCCTCCTTC CAGCTCTTGT ACAAATCACT ATCATTCCTA 540 AGGGGGAAGT CAACCTTTCT CAGGCCCCCA GACTGGGGCT CCCCAGAGCA GGGTGTGGCC 600 TACTCCTCTG GCCTGCTGCC CAGCTGAGCT GCCAGGGACA GGTCAGACAG GTCTGGCTGG 660 TGCAGAGGGA TGAGGTTCTG CAGCTTCCCC CTGCCCTTTC CGCTGCCCCC CTGCTCAAGT 720 CCCCAGGGAC CACAGCTGCT ACGTAAGGCC ATCACCAGGC CTTGACCAGG CACATGCCCT 780 TACCCTGCCT CCACCCAGGT TGGTGAATTC ACCCTCAGGA CAAGGCCTCA GCTCAGTGTG 840 GGTGTGTAGG AAGAAGGGTG CCCTTACCCA TCCCCAGCAG ATAGCCCCAT GTCAGAAGAC 900 CCTGGTGCTG CTCCTCCCCA CCACCCCAGG TCACCACTGT AGAGGAACAG GTTACTCCAA 960 AGGAAAAACT GCTCTATCTG CCTGGCCAGC CTCTCAGCTG GCTTCCTGCC TCCAACTTGA 1020 CTGGCTTGCC TGGAAAGAGG CCCAATATGC TGGGTGTGCC TACTCCTACC CCTCAACACA 1080 GCCTGTGTCC ATACTCCCCT CTGCAGGGCT TGTCCCCCAT CCCCTTTGCC CCTGCTTCCC 1140 ACCCCACAAA TACATACCAC 1160
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