Tag | Content |
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EnhancerAtlas ID | HS119-00067 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-1F5 |
Coordinate | chr1:223926960-223929110 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GFI1 | MA0038.2 | chr1:223927699-223927711 | GAAATCACTGCA | + | 6.74 | LHX6 | MA0658.1 | chr1:223928663-223928673 | ACTAATTAGC | + | 6.02 | Nr2f6(var.2) | MA0728.1 | chr1:223927104-223927119 | TGAACTCCTGACCTC | - | 6.22 | RORA | MA0071.1 | chr1:223927759-223927769 | TGACCTTGAT | - | 6.02 |
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| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_00224 | chr1:223925520-223928901 | Adipose_Nuclei | SE_01908 | chr1:223927075-223928148 | Aorta | SE_23408 | chr1:223927008-223928133 | Colon_Crypt_1 | SE_23408 | chr1:223928467-223929077 | Colon_Crypt_1 | SE_24051 | chr1:223927084-223928100 | Colon_Crypt_2 | SE_24051 | chr1:223928484-223928893 | Colon_Crypt_2 | SE_25230 | chr1:223927114-223928239 | Colon_Crypt_3 | SE_25230 | chr1:223928443-223929149 | Colon_Crypt_3 | SE_26209 | chr1:223926103-223928290 | Duodenum_Smooth_Muscle | SE_26925 | chr1:223926095-223928145 | Esophagus | SE_26925 | chr1:223928405-223929121 | Esophagus | SE_31491 | chr1:223923671-223928232 | Gastric | SE_31491 | chr1:223928466-223930048 | Gastric | SE_33950 | chr1:223927048-223928269 | HCC1954 | SE_33950 | chr1:223928379-223929152 | HCC1954 | SE_36294 | chr1:223927044-223927974 | HMEC | SE_37129 | chr1:223926584-223928521 | HSMMtube | SE_38254 | chr1:223928343-223932514 | HUVEC | SE_41495 | chr1:223927102-223928062 | Left_Ventricle | SE_42269 | chr1:223927049-223928176 | Lung | SE_42269 | chr1:223928490-223929116 | Lung | SE_50365 | chr1:223927008-223928158 | Sigmoid_Colon | SE_50365 | chr1:223928472-223929111 | Sigmoid_Colon | SE_53249 | chr1:223927086-223928250 | Small_Intestine | SE_53249 | chr1:223928478-223929116 | Small_Intestine | SE_64794 | chr1:223926064-223928210 | NHEK | SE_64794 | chr1:223928353-223929132 | NHEK | SE_65644 | chr1:223925909-223927309 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 223927976 | 223928193 | chr1 | 223928522 | 223929015 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I223736 | chr1 | 223924574 | 223930136 |
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Enhancer Sequence | CTGCAACCTC CACCTCCCAG GTTCAAGTGA TTCTCATGCC TCAGCCTCTC CAGTAGCTGG 60 GACTACAGGC GCGTGCCAAC ATGCCTGGCT AATTTTTGTA TTTTTAGTAA AGATGGAGTT 120 TCACCATGTT GGCCAGGCTA GTCTTGAACT CCTGACCTCA TGTGATCTGC CCACCTCGGC 180 CTCCCAAAGT GATGGGATTA CAGGTGTGAG TCACCATGCC TGGCCCATAA GCAGATTTTG 240 TACCTGAGCA GGAAGGCTAA GAGCTTGTAA CAACTGAACA TTCCCCCCGG AGAGGAAGGC 300 AGGAGTTTTG CTTGTGCCAA GTGCACTGTT CAGACAGTCC TCTGAGGTAC ACCAAGGTCT 360 GAGTAGCCAT CCCACCCTCC CCTCTGCCAA AATTTTTGTG TGACTGGAGA GCAGAGCCCT 420 CCTCCAAAAA TAAAATGAGC ACAAGGAAAA TACTATTTGC AGATACATAA TATTAAAACC 480 ATAGGTCTTT CTTTTTCTAG TCCCATCCAT ATGGCAACAT TCCAGGAGAG GCCTCCGTCA 540 CTGGAAGGCA CCCTCAGGGG CTTTCCTGGA GCTAAAAACA GTTTAAGCCA AAAGTTATTT 600 GTAGCATCTG AGTTAAACTC TTCGTCTCAC CCTTCTCGAG CTAGCTGGCT TATTTTATCC 660 GGACCAGGAT ATAACAGCTC TAAACAGGCT TTGCCAGGAA GAGACGTCAT GGACTTCAAC 720 CAGGGCACCT GACCAGGAAG AAATCACTGC AGGATGATCT GAAAGAGTTT TCATAAATTA 780 TTTTACGTAA GGTAGATTCT GACCTTGATG GGGACAGCCA AGGTTCTGGA CCCTCAGCTG 840 GGAAAGATGG GACTAAGTCT ACAACTGCTG AGGTTGTAGA ACAGGCTTCT TGTTGGGAGG 900 AACCCTCTTG TGGACATGGG CCGTCGAGGT GGAGTGAGAG AACACCGTGC CACCTGGACG 960 CTGAAACACC ATTGAGTCAC CTCTGTTTGA AATGCTTGTT CCCTGGTGCC GTAAAGAAAT 1020 AGCACTTGAA CATAAATTTA ATTTACTCAG CAAGGACATT TTTATACTTT CTGTGAAAGG 1080 GTACACTCAC CAGGAGTTTT GCCACGAGAG TACACCAAAC AAAGGAGACA GGGTCATTTA 1140 TAACCTGACG CGTCCACCCT ACTGCTGTGT CCAGTTTCCA TTGGCTGGAA CAGGACCTCC 1200 CATTCTGTAT TTGTCCCGAT TGGCTAACAA CTTAGAACTT TTTAAAAGAG GCAAAGGCAG 1260 AGGAGAACAA AGGAAGGAGG AAGTAACTTG TGGAATGCTG AGAAAGGTAA AAACACCTTT 1320 AGATAAGGAA GAGGAACAGG CTATGACCTA ATGCTTGCTT GGACCAGTAT AAGCATGCCA 1380 GGGAAAATAC TTAGGCTAAA TTGTGGGAGC TAAGAACATA AAGTACATTG ATTTCTTTAT 1440 CATGGCTAGC AGATATTTAA GAATGTTAGC ACAGGTCTTT GAATAAATTT TGCTTCTAAG 1500 AGAAGTTACT ATTTATTCCT AATTAAATGG GGAGGAAGGT CTTTGAAGAG AAACCTTTAC 1560 ACCTCTTAAG GACAAAAGTC CCCAAGACCT GTCCAATTTC GAATTCAATT AGGTGAATTC 1620 GAAATTGACA CCAGCCTCTT TGCAGAGGAG ACTGTTTTGG TTATACATCA AAAGCCTGTG 1680 CTTTGCAGAT AGACCTGACA GCCACTAATT AGCTAGGAGC GTTGGGTGAT CCAGTCCACC 1740 TCCTTAAACC TCAGTTTCCT CAACTATGAA ATAGAATGAA AATAGTACCT ACCTTGGAAC 1800 TGTTCTGTGA CAAGGAAATG AGATAACATG ATAATGTGCA TAAGGCTTTT AGCTCGGGGC 1860 CTGGCACACC TAAGCCTTTG TGTAATCATT GTGTAGATCT TGTCACTGAG AACGCTTACA 1920 CGAGCAGATA TTAAAATAAA GGAAAGAAGT CAGTTGGGTA AGGGAGCTTC CCAGCTTGGT 1980 TCAAAATATT TTGCTGATTG GGGTGAGGGA AAGAGTGAAG GAACCAGAAG CAAAAAAAGT 2040 AGGATTTCAA ATGCTTCCCA CCTTTTTAGA AATCAAGACA TTCTTTAGTG GCCTCTACAT 2100 CTCCTTCAAC TCCAGAATTT GGAAAACTGA TGAAAAACTT TTTGAATCTT 2150
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