Tag | Content |
---|
EnhancerAtlas ID | HS119-00056 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-1F5 |
Coordinate | chr1:204057420-204058750 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
POU2F2 | MA0507.1 | chr1:204057583-204057596 | GGCATTTGCATAT | + | 6.3 | Pou2f3 | MA0627.1 | chr1:204057582-204057598 | TGGCATTTGCATATAA | - | 6.44 | SPDEF | MA0686.1 | chr1:204058253-204058264 | TACATCCGGGT | - | 6.62 |
|
| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_01182 | chr1:204056274-204058246 | Adrenal_Gland | SE_01182 | chr1:204058247-204059454 | Adrenal_Gland | SE_03017 | chr1:204056278-204058243 | Bladder | SE_03017 | chr1:204058249-204059534 | Bladder | SE_04661 | chr1:204056379-204058327 | Brain_Anterior_Caudate | SE_04661 | chr1:204058370-204059675 | Brain_Anterior_Caudate | SE_06365 | chr1:204056169-204060053 | Brain_Hippocampus_Middle | SE_24644 | chr1:204057659-204057977 | Colon_Crypt_2 | SE_24644 | chr1:204058329-204058842 | Colon_Crypt_2 | SE_31799 | chr1:204056312-204059529 | Gastric | SE_41791 | chr1:204056249-204059508 | LNCaP | SE_42361 | chr1:204054906-204059621 | Lung | SE_47675 | chr1:204057647-204058068 | Pancreas | SE_47675 | chr1:204058262-204059202 | Pancreas | SE_49400 | chr1:204056234-204059271 | Right_Atrium | SE_50648 | chr1:204056148-204059540 | Sigmoid_Colon | SE_53078 | chr1:204056234-204059443 | Small_Intestine | SE_54451 | chr1:204056226-204059533 | Spleen | SE_65332 | chr1:204054712-204059717 | Pancreatic_islets | SE_68685 | chr1:204056205-204059260 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I204087 | chr1 | 204056343 | 204060013 |
|
Enhancer Sequence | ATGCTGGTCG ATTCGGCTGG GGACACTACT CTGGGTTCTC CTAGCCAGGT GGTCAGATGA 60 CTCCCTACGT AGCCTTGGAA ACTGCCCAAA TAAGAAAGAG AGCGAGGCAG AAAGAGCAGC 120 AGGGACACTC GGATTTTTCC AGGGGCTTTG TCCATATTTA CATGGCATTT GCATATAACC 180 AGTACACTAA ACATAATTTT ATAATCTATC CCCAGGCACA TTCAGATTTG CCTTTTACTC 240 TTGTTCTTTC CAGAGATGGC TGGTTCTGCC TTTTTGCACC TGTCTGTGCC TTCTCACTCC 300 TGTCCCGTTA CCCCCACTCC CAGACTGGGG GTAGGTGACT GGGAACAGAG TCAGTGTGGG 360 GTAGGGGTCA TTCCTGCTGT TGAACTGATC TGATAAGATG AGATCAGACC TGACCTCTCT 420 GGGCTTAGCA CAGACGGCTG GATGCACAGG CCCAGCCTCC CCTCTGCATC CCACCCCAGC 480 GGCCACCACC TCGCCTCGTC AGGGATCAGG ACACCATGCC TGGCACTCAG CAGGTACCCA 540 TTAAATGTGA AGTGAAAGCT CAATTAGAGT TCGGACAAAT ACATACTGTG CAGGCTCCTC 600 GGGACCTGGC TTTTGAGCTC ATGAAGGGAG ATGCTGGTGG GTTGAGGGGA GCCTCCAGTG 660 GTCCAGAGGG TGGGAGGAAT CAATTTCCCT CTCAGCGATT GTGACCAGGG AGGCATTTCT 720 TTCTCTGCTT GGCCTTGCAG GAAACAGTGT TGAGAATGAG AGGAGCAGAA AGGAAGAGCT 780 AGGCCTTGTA TTAATTTGTT TTTCAGATTG AGTCTCTGTT ACTAGCAATT TATTACATCC 840 GGGTCTCCAG CCAAGCACAT TCTGTTCTCC AGTGTTGGGG GAAGATGCAT GGGGGGGTGG 900 GGAAGAGGCT GGACAGGAAA GAGGAGCAGA TCAACAATTT TATGACTGAG TGTGTGGTGT 960 CTTGGCGTGC GCTAGAGGAC GGTTTTAGCA CAGGGCATTT TGAGCCCAGC CCCGTGTGGG 1020 GAGGCACTCC TCTGGACAGC ATGGCATTCC CATGCGAGCC CAGACAGCCC TGGGGAGCAG 1080 GATGAATGGG CTTCCCTCCC ACTCTCATGC CCGCCGGCCT CAGGGTCCAG ATTTCTCTCT 1140 GTGAAATGAG GTCAGGACAG TGATGCCTGG AACAAAATCA TAGTTTCTTG AGGCAGCGGG 1200 GCCTGGGGAG ATCCCTCCGA GGAACAGGGG AGCAGCTGTG TGAGGGGACC CCGGAAGAGG 1260 GGTAGCAGGC AAGGCGGCCA CCCTGTGGAA AGAATGGTGC ACAAGCAAAA CAACCCCCTC 1320 TCTGCAAAAG 1330
|