| Tag | Content |
|---|
EnhancerAtlas ID | HS119-00020 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-1F5 |
Coordinate | chr1:94049930-94051320 |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gfi1b | MA0483.1 | chr1:94050147-94050158 | AAATCTCAGCA | + | 6.32 | | KLF4 | MA0039.3 | chr1:94050705-94050716 | GCAGGGTGTGG | - | 6.62 | | Mecom | MA0029.1 | chr1:94050605-94050619 | AAGATAAGACAAGA | + | 6.59 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_00285 | chr1:94048823-94052046 | Adipose_Nuclei | | SE_24467 | chr1:94047354-94051276 | Colon_Crypt_2 | | SE_29507 | chr1:94046603-94051815 | Fetal_Intestine_Large | | SE_30459 | chr1:94049165-94051088 | Fetal_Muscle | | SE_31653 | chr1:94046979-94051493 | Gastric | | SE_36105 | chr1:94049690-94051592 | HMEC | | SE_45907 | chr1:94049048-94051466 | Osteoblasts | | SE_50800 | chr1:94047141-94051486 | Sigmoid_Colon | | SE_51412 | chr1:94049076-94051461 | Skeletal_Muscle | | SE_57128 | chr1:94050005-94050630 | VACO_400 | | SE_57128 | chr1:94050911-94051327 | VACO_400 | | SE_65777 | chr1:94049616-94050970 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 94050231 | 94051222 | | chr1 | 94050618 | 94051200 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I093578 | chr1 | 94043818 | 94052134 |
|
Enhancer Sequence | GCCTCCTCTG GGCTGTTCCA TCCTGTTGAA CAGAGTAGGG TAAAAGTTTT ACGATACTCC 60
CGGGAAAATC TGATGAACTG GAATGTGTAC TTTTAACAGA GCCTAAAATT ACTTACAGGC 120
CCAGAGGGAA TGGCTTGCCT AACTAACATG CATTTTCCAC ATGCTCCATA GTGTTGCAGT 180
TAGGAAGGAA GCTGTGGGGA AACTTCCATT TTGGTGCAAA TCTCAGCATC CCCCAAATAA 240
CCTGCAGGAC TGCCTGGGGA GGCTGCCATC CCCAACCTCC TGGCTGCTCT CGGGGGACCC 300
CCACACAGCC TCCTCCTGCT GAGCTGGGAA AAGGCACCGG CACGGTCACC AAGCAGCAGT 360
TGGGAGGCAC ACTGTGTAAC CACACAAGGA AAAGGTGGAA GGTAACTTTC AACACACTCG 420
CTGTTATTCC TTCTGTCCCT TTCCAATTCA GACTGGGAAT TTCTCCAGCA CCAAGCACCA 480
GAATCTCCCT AGCTAGAGAC AGAGGCACTG CACCAGCCAA GTTGTTATGA ACTTTAATTG 540
GCCTTCCCAT AAGCATAAAA CATTGTTATG TTACAGAAAT CACGAAGTTC TTTCCTACCT 600
TTACAAGCAC CAAAGAAAAA ACAAATCAAA AAACCCCCAA ACTCCAAGGA ACAGAGAAAT 660
TCCAGCAACC TTTCGAAGAT AAGACAAGAC CGAGGGCAAA TTACAAAAGG AAATATCTCC 720
CGAGAAGTGA TATTTAAGCA GTGACCACTG CGGCTGGACT CCAGGGGCCA GAACGGCAGG 780
GTGTGGAATG CAACCTGCCT GTGAGCACAC ACCTTCGCCC AGGGCAGGCC ACCAGCCAGC 840
CAACTAGCAG GCCCGACGTC AGGGCAGGTG GCACCTGGCC AGAGCTGCAT AAGGGAGCCA 900
CTGAAGGACA CTGGGGCAGG GCAGCAGGCC ATGAGCCATC TTTTCCCCTC CTCCCACTTA 960
AACATTTCTG GGCGTGCTGC GTGTACAAAG TGGTGACAAG TTCTAGGAGG ATCTGCATTC 1020
CAAAGGGCAA ACAGAAAAGT GGCTCTATTA GGCCTGACTT GTTGACTTAA GAGACTTAGT 1080
CTTTTTTTCA TTTCTTATCT TAAAAAGTTT TTAAACCAGG ATCATTCAGG GCCAACTAGG 1140
AGGCCTTCCC TGCAGCAGTG GTTCTGTTAT CCTGCCGAAT ACACTCCCAC TCTGTGCATG 1200
ACATTAATTC CCTGCTTCGA CCATTCAGCA GCCTATCCTT CCCAAAGGAA ACAGAAGAAA 1260
AGGTACCCCT TCTAACACTG TAAGGCATCT CAAGTCCAAT CCTATTACTA TGAAAAGGAG 1320
GATTTCTAAA TATCAGGTCT TGCCTCCCTC CTTGCAATTG CCCTGAGTTT TTTTGTTTGT 1380
TTTGAGACAG 1390
|
