EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS118-11586 
Organism
Homo sapiens 
Tissue/cell
Liver 
Coordinate
chr20:52211080-52214130 
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs2766680chr2052212273hg19
TF binding sites/motifs
Number: 3             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
NRF1MA0506.1chr20:52211202-52211213TGCGCAGGCGC-6.62
RxraMA0512.2chr20:52212474-52212488TAACCTTTGAACTC-6.45
SOX10MA0442.2chr20:52213336-52213347AAAACAAAGAA+6.62
Number of super-enhancer constituents: 75             
IDCoordinateTissue/cell
SE_00202chr20:52202678-52214133Adipose_Nuclei
SE_01520chr20:52209531-52211464Adrenal_Gland
SE_01520chr20:52213067-52213516Adrenal_Gland
SE_02842chr20:52211047-52212970Astrocytes
SE_09307chr20:52210896-52214110CD14
SE_10450chr20:52211152-52213238CD19_Primary
SE_11048chr20:52190427-52216823CD20
SE_12021chr20:52211177-52213666CD3
SE_12932chr20:52211054-52213381CD34_Primary_RO01480
SE_13374chr20:52210878-52213578CD34_Primary_RO01536
SE_14131chr20:52210969-52213729CD34_Primary_RO01549
SE_14425chr20:52202041-52214106CD4_Memory_Primary_7pool
SE_15674chr20:52210701-52212386CD4_Memory_Primary_8pool
SE_15956chr20:52210382-52214173CD4_Naive_Primary_7pool
SE_16436chr20:52210690-52212288CD4_Naive_Primary_8pool
SE_17103chr20:52202750-52213705CD4p_CD225int_CD127p_Tmem
SE_17516chr20:52201500-52216419CD4p_CD25-_CD45RAp_Naive
SE_17991chr20:52193412-52214055CD4p_CD25-_CD45ROp_Memory
SE_18376chr20:52210862-52216651CD4p_CD25-_Il17-_PMAstim_Th
SE_19367chr20:52200784-52213640CD4p_CD25-_Il17p_PMAstim_Th17
SE_20514chr20:52211048-52213372CD56
SE_20778chr20:52211112-52213783CD8_Memory_7pool
SE_21595chr20:52211012-52214031CD8_Naive_7pool
SE_22055chr20:52202560-52214121CD8_Naive_8pool
SE_22608chr20:52211026-52213993CD8_primiary
SE_23631chr20:52210978-52214241Colon_Crypt_1
SE_25474chr20:52210938-52213690DND41
SE_25863chr20:52211069-52214484Duodenum_Smooth_Muscle
SE_27064chr20:52206886-52213719Esophagus
SE_28086chr20:52211036-52214777Fetal_Intestine
SE_29066chr20:52202792-52214627Fetal_Intestine_Large
SE_29954chr20:52210935-52213831Fetal_Muscle
SE_31207chr20:52211083-52214290Fetal_Thymus
SE_31876chr20:52210948-52211678Gastric
SE_31876chr20:52212463-52213553Gastric
SE_32501chr20:52211091-52213720GM12878
SE_32761chr20:52211095-52213689H1
SE_33810chr20:52211181-52215497HCC1954
SE_34736chr20:52211094-52214225HeLa
SE_35415chr20:52211115-52214489HepG2
SE_37291chr20:52202533-52213670HSMMtube
SE_38829chr20:52211081-52213418HUVEC
SE_39111chr20:52211076-52213581IMR90
SE_39554chr20:52211290-52212286Jurkat
SE_39554chr20:52212321-52213623Jurkat
SE_40005chr20:52211151-52211940K562
SE_40005chr20:52212319-52213437K562
SE_43170chr20:52210972-52211711Lung
SE_43170chr20:52212352-52213704Lung
SE_43404chr20:52210890-52218067MCF-7
SE_43529chr20:52194716-52214275MM1S
SE_44298chr20:52211092-52213622NHDF-Ad
SE_45084chr20:52211049-52213618NHLF
SE_45865chr20:52211013-52214121Osteoblasts
SE_47117chr20:52211085-52218376Panc1
SE_49906chr20:52211123-52216953RPMI-8402
SE_50336chr20:52206911-52211705Sigmoid_Colon
SE_50336chr20:52212332-52214120Sigmoid_Colon
SE_52644chr20:52210947-52212288Small_Intestine
SE_52644chr20:52212302-52214097Small_Intestine
SE_53525chr20:52205481-52212217Spleen
SE_53525chr20:52212250-52213715Spleen
SE_55284chr20:52211039-52211901Thymus
SE_55284chr20:52212293-52212803Thymus
SE_55284chr20:52212816-52213622Thymus
SE_55973chr20:52203310-52214067u87
SE_58388chr20:52194578-52305868Ly1
SE_60096chr20:52194891-52241355Ly4
SE_61672chr20:52194577-52244989Toledo
SE_62467chr20:52194714-52241390Tonsil
SE_64158chr20:52210996-52212869HSMM
SE_64415chr20:52211102-52214856NHEK
SE_66461chr20:52211290-52212286Jurkat
SE_66461chr20:52212321-52213623Jurkat
SE_68377chr20:52196064-52241229TC32
Enhancer Sequence
CTCCCCGCGC CCCCCGCCCC GCACCCCTCC TCCCGCCATC CGGCTTAACG TGGCGGGCGC 60
GCGCCGCGGC GGTAGCCGTG ACAGGTACCC GGGGAGGCCG GAGGGAGGGG GCCGCGAGGG 120
TGTGCGCAGG CGCAGATCCG GCCCTGTCCC CGCCGCCCCC TCCTCTGCAA GGTGTGCGCG 180
GGCGAGGGGA GGGGCCCGCG GCCCGAACCC CTGGGTCACC CCGAATTACA AACAAAAACC 240
TTAACGCCGT TGCTCGCGGG TTAGAAGGCA GCTGTGCGCG AAAAACACCA AAGATTTTCT 300
TCAAGCTTGA GGAAGGTCGA GAAGATAAAC AGTTTTTAAA TGAGTATCTT CAGAAAGCTA 360
TTTAATTGTT GTGATTTTTT TTTTTCTGAA AGGGCTGGGC TTGCGCTATT CTAACTTGAG 420
ATTTCTAAAC TTAGCCTAGG TTCCAAGAAT CTACTTGGTT TTGATAGAAA TCCATTTGGA 480
GGAAACCGGG GACAAAAAAA GGGACAAAAA AAAAAAAAAA AAAACCGCTA CCCTTTCCCC 540
TCCTCCCTAC GCACAACTCA TTTAAAGCGT TTCCCAAATG TTTTCTTTCC TTACTGAAAA 600
AAAGGACAAA AAAAAGATCC TGATTCCTAA GGCCTGTGAT ATTTCCCCAT TTTAAATAAG 660
CTTCGAGGAA CCATAGACAT AACAAGCACA TCCACAATTT TTCTACCCCA AAATGCAAAC 720
TAATGCAAAT GTGAAATGGA TCTATGCAAG TCGCTACTAA CAAAATAGCC AAATATTTGT 780
GTTTTTACCG GCCTTCAGCA TATCCAAAAT GAAAAAACTT TAAAACACAT CAAGAAAAGC 840
ATTTAAAATA TCTATTTCCT AAATCAAAAG AAAGAACGCA CTACAGAAAC GATCCGGAGC 900
TGGTGAGCAA TGCAATCTTA ATAAATAGGA AAAGGAATTT GAGAAGACAG CTCAGCAAAG 960
GGGAAGAATT TGCCAAGTGT CATGTTTTGC TGTCATTTTA TATATAACTA CTAACCCCAC 1020
ATATGGTCTG GTTAGTCTTT TTTAAAAAGG AAGCGAATCA ATTACTCACA ATTAATTAGC 1080
AGTGCCAGTA GATTCTTAGG CCAGCACTAA AAAACTAAAT TGGGTGAATT TTTTTTCACT 1140
CAAGTCCACT GATATTGATC ACTTTTAGTA TTAGGATTCC TTTTCTGACA AAGGATGAAT 1200
ACCTATCTTT AAAATATATT TTTTAAACTT ATTGTCACAT TCTAAAACAC AGTCCAAAAA 1260
CACTTCATAA ACAAGAAACT TCATTTAACT TTATGAAAAC AAATGACTAT GAGCCTTGCT 1320
ACACAACAAA GAAACTATGA CCAAGTGGAA CCAGGTTGAG CCTGAAGTGT AACCTCATTC 1380
TACATGTTAA TGGATAACCT TTGAACTCCG AGACCTTGAA TGCTGTAAAC ACAATAGCAC 1440
TGATAGTTAA AAATTCTAGT GTCAAAATCG AGCAAAAAGA AAAGTCCAAA CTTTTCAGGG 1500
GGAATAGGGA AACAATCAAA TATTTTGACA AATAATCGTT TCAGTAAGAA CAAGGAGATT 1560
CCTGGCTCTC AGACCTTGTT GCTACTGAAT TATTTTCTGA GCAAAAACGG TTGTGCTTGT 1620
TTTCCCCCTG TGCCCTCCAA AGCTACCACT TTGTTCACAT TATAGCATCA TGATTTGTTA 1680
CTGTTTCGCC GCCTCTCTCA AAAAAAAAAA AGAGAGCGCC TTATTATGTT GTAGCTTTTA 1740
AAACTGAAAG ATGATTATAA TTCACTGATC TGTCTGCTAA GAGTTTTATT TATATGTGAT 1800
CCTCCTTATG TTTGAGCAAA GAATTACAAA GAACCTTGTC CTGGAGTCGT GCCAACGAAA 1860
CTGGGAAATC GTTGCAAAAT TCTGCCAGTG ACTGACTGCT GGGTTGCAAA TACATACTGT 1920
GTTTTCAGAA GGACATAGAG GGATCTGAAT TCGCCTGGGA GGGCTTTTCC CTAAGACACA 1980
TTCTTCCCTT AGAATGTGAG ACTCATACTT CCCATTTATT TGGAAAGCAT GTATAGTTCA 2040
AACAATTAAA ATATGGAAAC TCCAAAAGTA ACAGGAGAAC ACTGGAAGCA TTTGGTTTTG 2100
TAATAAAAGC TAGGAACTCA TACTGCACAA AGTGAAAATT GAAAATCGAA CGTTGGTCTT 2160
CCTATGCTTA GCTCCACCCA CAAGAAATCC AGCTTCGCCA TCACTCCCTG CGTAGGCCAT 2220
CTCTAAAGGA GTCAGGTGCT ACTAGATGCC AGCAAAAAAA CAAAGAATGG AACCAAAAGA 2280
GAAGCTCTGC ACATGGTACT TGGAGAAGGG GCAGAAAATC CCCACTTCAC CTTCTTTCAA 2340
TGCAGCAAAC ATCAGCTACA CCTCATTTTT CACAATCATC CAAACAGGCC CTCCTTAAGA 2400
CATATTTCCT AGTATGCGCT TATAAAATCA CACCATTATC TCTAATTTAA TCCTAGTGAT 2460
ATAAGGCCTC TTCGTTTAGC CAACATCTGA TTTTCTATCC AGATCCTGCC AGTCACAGCA 2520
TGCTCAGATC TAGTAACATA ACAAAAAAAA AAAAAGAAAA AAAAAAAAAA AACTTCTGAT 2580
TTGCTGTATT TAACACTTAC TGGAATCCTC TTTTGAGACT CAGCCTTAAT TAGAAGAACA 2640
GAATGAGGTA GGATCTTCTT ATTTCACAAG ACGTTATTTT ACTGTGGAAC TATTATAGAA 2700
AAACTATTTG GAAACTGTGT GTAAATCCCT GGAGCTGAAA CAGAGCCAAC ATAGATACGG 2760
GACGTAAAAG AATTCAGTGT TCAGAGCAGG AAAACCTGAA AAACTGCAGT GAGGAGTTAG 2820
CAGGAAAAGA ACATGAAAAA GTTAGGCAAA CCTGCCAGCA TCTGCAAACT ACAAAGGACA 2880
TTTGAGAAGG AAACAGGGAC AGCCCTTTGA ACAAGACTAA ATGCACTCAA GTAAGTAGGA 2940
ATAACAAACA GCTCGAAGGA GCACCACATT GCTCTTTTCT ATTAAGTTTC TTGATCCCAT 3000
GCAAGTCACT CTTCTGTAAA GTATCACAAT AATATACTAT TAAAAAAATA 3050