EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS118-01865

Organism

Homo sapiens

Tissue/cell

Liver

Coordinate

chr1:234644640-234646260

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3

MA0041.1

chr1:234645238-234645250

AAACAAACAAAC

6.32

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_03881	chr1:234645243-234645985	Brain_Anterior_Caudate
SE_25723	chr1:234645465-234646244	DND41
SE_33599	chr1:234645183-234646366	H2171
SE_33857	chr1:234645119-234646271	HCC1954
SE_45860	chr1:234645149-234646275	Osteoblasts
SE_61054	chr1:234622432-234680799	HBL1
SE_61473	chr1:234622384-234680928	Toledo
SE_68387	chr1:234634206-234681763	TC32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I234509

chr1

234645347

234646008

Enhancer Sequence

TTAATAATGA GTGAATCCTA GTTCTCATAT TTACTAGCCG TGTGACTTTG GGCAAAGTAC 60
TTAACCTCTC TGAGCCTAGA TTCCTCATCT GAAAGCCTGG CCAGTGCCAA CTACCAAGTT 120
GTTGACATGA AGATTAAATG AGAAACTACT TATAACACAT GGAGCTAGAA TGGAGATGGA 180
AGACTAGGTC CCAAAATCTG CTGCTGGGAA AGCAGAGGAG AGAAGATCAG GCTGCAGAGT 240
GGGAGGTTTA TGGGACTGGG TGGGTGAACA GAGGATTTGG CATTGTTGCT TAGAAAAGCT 300
ACTTGGGGCC GGGCGCGGTG GCTCACGCCT GTAATCCCAG CACTTTGGGA GGCTGAGGCA 360
GGCAGATCAC CTGAGGTGGG GAGTTCGAGA CCAGCCTGAC CAACATGATG AAACCCCGTC 420
TCTACTAAAA ATACAAAATT AGCCGGGCAT GGAGGCACAT GCCTGGAATC CCAGCTACTT 480
GGGAGGCTGA GGCAGGAGAA TTGCTTGAAC CCGGGAGGCG GAGGTTGCGG TGAGCCGAGA 540
TTGTGCCATT GCACCCCAGC CTGGGCAACA AGAGCGAAAC TTTGTCTCAA AAAAACAAAA 600
ACAAACAAAC AAAAAAAGCT ACTTGGGCCA GCTTATTTCC CAGAGCCTGG CCTTGCCCTG 660
TTCTCCCTGC CTTCTTGTGT AGCTGGATTC TTGTGAATAA CCCGGGTCTG CCCCCGGGGA 720
CTTCCACCAC GTGTGCTATA CCTCTGAGGC TGCACACTCT CCCACCCAGT GATTTCCCAT 780
GGGTTTTCTG CCCCTAACTA TCCTGGATCT ACCCCAGCCC TATTTAGACC ATCTACCTGC 840
TGGCCTTTTT TATTCACTTA TTCATTCATT TCACAAAATA CTTTTCGGTC CATCTGCCCC 900
ACAAGACTTT CAGCTTCTTG CCAGCTCCCC AACAGCCCCA CCCTCAGGCT TATCCCTCCC 960
TCCCTGGAGG CTGGCTGCAT CAGAGGTTAC CTTCACCCGC TGCCAGGAGC AAATGCTGAC 1020
ACTCAGTCGA TATTTGTTGA CTAAATAAAC ACATAGAAAA AGACTTTTTA AAAAATTACC 1080
ACCCCTTCTA GATCCCCAGC CCCCGTTCAG GCTGATGCAA TCCAAATTTC TCTGCACCAT 1140
GATGAGTTCA GTGCTGGCAG CTTGGTGATG GCGCATAAGT AACTAGGTTT CCCAGCTCTC 1200
AGGCAGCCAT TCCCAGCACC TCTGTGAGTT TCTGATTTTC AACTATCCCT GGGGCTTACA 1260
AATGCTAATA GTGGCTCTCT TCACATTACT GTAATAATAC TTAGCACTCA TGTCCTGACA 1320
TAAAATCAGT TCAAGTGCTC CCACACCCCC TGGTGAGGTA GGACCCTTAT AGCATGCTGC 1380
TGTAAAATGA GCAGCTGAAG GTGCTGGGGT GCAGCTAGGG CCACACTTGG CTTTGATCTG 1440
AAATACCAAT TTCTTTTTTT AATTGCTTTT CTTCCTTGAT ACATGCATAC AAAGTGTAAT 1500
GATGAAATCT GGGTAATTGG AATATCCGTC ACCTCAAACA TTTATCATTT CTTTGTGTTG 1560
AGAACGTTCC AAATCTTCTC CCTTCTAGCT ATTTCGAAAT ATACAATAAA TAATTGTTTA 1620