EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS118-00419

Organism

Homo sapiens

Tissue/cell

Liver

Coordinate

chr1:39633230-39635460

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CEBPA	MA0102.3	chr1:39633660-39633671	TGTTGTGCAAT	-	6.14
IRF1	MA0050.2	chr1:39635435-39635456	TCTTTCTTTCTTTTTTTTTTT	+	6.25

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_14598	chr1:39633636-39635793	CD4_Memory_Primary_7pool
SE_35822	chr1:39633398-39634281	HMEC
SE_36947	chr1:39633308-39647246	HSMMtube
SE_47164	chr1:39633447-39641582	Panc1

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I039167

chr1

39633273

39635433

Enhancer Sequence

AGCTGGGCGT GGTGGTGCAT GCCTGTAATC CCAGCTACTC AGGAGCCTGA GGCAGGAGAA 60
TCGCTTGAAC CTGGGAGGCA GAGGTTGTGG TGAGCCAAGA TCATGCCATT GCACTCCAGC 120
CTGGGCAACA AGAGTGAAAC TCTGTCTCAA AAAAGAAAAA AAAAAATTAG CTGGGTGTGG 180
TGACAGGCAC CTATAATCTC AGCTATTCAG GAGGCTGAGG TAAGAGAATC GCTTGAGCCA 240
AGGCTTTGGA GGTTGCAGTG AGCTGAGATT GCGTTACTGC ACTCCAGCCT GGGCAACAGG 300
GCGAGACTCC GTCTCAAAAA AAAAAAAAAG AGAGAGAGAG AATTTGGTTT TTAAAAATAT 360
TTTATGTTGA ATGTTAGCTG GAACTGGAGA TCCACTTTAC CCCCACAGCT CAAGTTCAGC 420
TTGACCCTTA TGTTGTGCAA TGCTTTGTGT TTGGGTTGGT ATTTCCTGGG ACTGGTCAGG 480
TGATGCACTT CAGCATGAGG CCTGTGTAGT AGCTGAAGAG TAGTGACCCA AGGTGTCTAT 540
CAGTGATAAG AGGAGAGAAG AAGCCCGTTT AGCTCTGGAC AGGGCCTCTG TTTCCTCTGA 600
GATCTCTTGT CTACTCTCCC TGGTCCAGGG CTCCATCTTT GCATAACTTT TTACAGATAG 660
ATTTGAAGTG CCAACTTCAT TCTGTTTTGG AGTACTGGCA TTGGACACAA TTGATTACAT 720
CCCTGCCTGT TTAAAATATT CTCTTCTTTT ACCTTCAATG AGAGTATTTC ATGGTTTTCC 780
TTAACCTATC TGATTGCTGT TTGTCTGCTT TGTTGGGTCT TTTTCTTCTT CTGACTCTTA 840
ACTGTGGCAG TTTTCTAAGG GGTAAGGCAG TGTAGTGAAG TGGGAAGAAC ATGGGCTTTG 900
GATCCAGGCA GGGCTGGGTT CAAATATATG TTTTTTGTGT GTGTGCGTGT GTGTGGAGAA 960
CGGTCTCGCT ATATTGCCCA GGCAGGTCTC GAACTCCTGG GCTCAAACTA TCTTCCCGCC 1020
TCTGCAGAGC TCCCTGAGAG CTGGGATTAC AGGCGTGAGC CACTGCGCCT GGCTCAAATC 1080
TGTGTTTCTA CATTTATCAG CTGAGTGACC TGGGGCAAGT TACTCACTTT TCCTGAGCCT 1140
CAGTTTTTTC ATCTGTAAAA TGGGGATAAT AATATCTTCC ATATAAAATT ATGAGGATTA 1200
AACAGAGTAG TATAAGTAAA TTTTCTTATT GCCTGATTGA TCGGTTGATC GTAGAGATGG 1260
GGGTCTCTGT GTGTTGTACA GGCTGGTCTG AAACTCCTGG GCTCAAGTGA TCCATCCCCT 1320
TGGCCTCCTA AAGTGCTGGG ATTACAGGTG TGAGCCACTG TGCCCAGCCC AAACTCAGTA 1380
TTTTCAAACC AAGCTTAAAT TTGGCTTTTC TATCCTAGTC CCCATTTTTT GACAGTTGAA 1440
CTCACATTCT TCCAGTCTCT GAGATTAGAA ACCTTGCAGA CATCTGTTAA CTCTTTTCTC 1500
TTCATCAACC CCATTTTCAA TCTGTCATTG AGTTCTTTTG TTCTTCAGAG TTTCTCTTAA 1560
ATTTGTCTTT TTCTCCCCAT TCTCTATTCC ATGACTCTAG TCCAGTCACT TATCACTTTG 1620
TACCTGAATT ACAGCAACCG CCTCATATTT TGTTTTCTGT GTCCTGTTTC TCTCTTCAGT 1680
TAACACCGAA GTAGCAGCTA CTTTCCTAGT ATTTCCTATT ACTGAAAGTC TAAATTTGTT 1740
ACAAAGACCT TTTATGGCTG GACCTGGTGG CCCATGCCTG TAATCCCAGC ACTTTTGGAG 1800
GCTGAGGCAG AAGGATTGCT TGAGGTCAGG AGTCTGAGAC CAGGCTAGGC AACATAGGGA 1860
AACTGTGTCT CTACAAGAAA AAAACATTTT TTTTTAAGTA GCCAGACCTG GTGGTGTGTG 1920
CCTGTAGTCC CAGCTACTCA GGAGGATGAA GTGGGAGGAT TGCTTGAAGC CCAGGAGGTC 1980
CAGGCTGCAG TGAGCCATGA CCCTGTCACT GCACTGTAGC TTGGGGACAG AGCAAGACCC 2040
TGTCTCAAAA AAAAAAAAAA AAAGACATTT TATGCTCTCA TCCCCTTCCT ACTTAACCAG 2100
GCTTATCTCA CTTATTTTCC TAGAACACAC CTTCAGTTCC ACACAAACCC TGTTCCTCAT 2160
TGTGTCTTAT CCTCCCTCAT TCATTCTCTC TCCTTGCCCT TTCTTTCTTT CTTTCTTTTT 2220
TTTTTTTTTT 2230