| Tag | Content |
|---|
EnhancerAtlas ID | HS117-05769 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr5:172880440-172882550 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOS | MA0476.1 | chr5:172881546-172881557 | GGTGACTCATT | + | 6.02 | | NFIC | MA0161.2 | chr5:172882193-172882204 | TCTGCCAAGTA | - | 6.62 | | SPIC | MA0687.1 | chr5:172881138-172881152 | GAAAAGAGGAAGAA | + | 6.47 | | TEAD1 | MA0090.2 | chr5:172880470-172880480 | CACATTCCAT | + | 6.02 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_02681 | chr5:172879030-172884932 | Astrocytes | | SE_37086 | chr5:172877726-172887605 | HSMMtube | | SE_39123 | chr5:172877718-172885067 | IMR90 | | SE_45683 | chr5:172877133-172886912 | Osteoblasts | | SE_51760 | chr5:172880346-172885509 | Skeletal_Muscle_Myoblast | | SE_56212 | chr5:172876255-172885423 | u87 | | SE_63550 | chr5:172880273-172885422 | HSMM | | SE_67922 | chr5:172876255-172885423 | u87 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I173450 | chr5 | 172877561 | 172887133 |
|
Enhancer Sequence | ACATTTATTT TGGAAGGCAC TCCTTGATCT CACATTCCAT AGCAGATGCT GTTGGTGCTT 60
TTTCTATATC CACCCTGGGC TACCTGAGTT CACTTGAGGT AGTGGGCAAC AGTTTTCAAT 120
TCACTGACAG AGTCCCATCT CCAGCTGCTT AAGGGCTTTC TCTGGGGGTG TTAACGCTTC 180
CAGGGGAAAA CCTCAACTAG TTGGGGATGA GAGTAGATGG ATAATTGCCC AGTCCCCCAT 240
CCTCTAATGG GCCTAGGCTG AGCCATGTTC CACGTGGATT CTGAAGAACC CCCAGCAGGA 300
CGGAGCTCCA AGCTGTAATC TATCCCTTGC TGGCTCTTCT CCCTTCCTTG TCTCACTCTC 360
CCCTTTTGTT TCTCCTGGAA TAAACTCTTT ATGATGTAGA TATCTGACTT CTATGATATT 420
TAGATGAGAC TTGGGACTTT AGAGTTGATG CTAGAACCAG TGAAGTCTGT TGGGGCTGTT 480
GGGATTGAAT GAATTTTGAA TGTGAGAAGG ACACACATTT TGAAGGGCCC GGCATGGAAG 540
GTTATGGACT GAGTGTTTAT GTTCCCCCCA TCTCATATGT GAAAACGCTA ACCCTCCCCG 600
TCATGCGACG GTATTTGGAA GGGAGGTCTT TGGGAGGTAA TTAGGGTTAT GTGAGGTCAT 660
GCGGGTAAGG GTCTCCATAA TGGGATTAGT GCCCTTCTGA AAAGAGGAAG AAATACCAGA 720
GTGCCTGCAC ACTGTCTCTG ACAGATGAGG ACATAGCAAG AAGGTGGCTA TTTGCAAGCC 780
AGGAAAGGAA TCTTCCAGCA CCTTGATCTT GGATTTTTCT AGCCTCCAGA CTGTGAGAGA 840
TAAATTCCTC TTGTTTAAGT CGCCCAGCCT ATGGCAGTTT GTTATAGAAA TCTGAGCTAA 900
GACACTGTAT CTAAGTCCTT GTCTGAAAAT CCTTGGACAT TCCTCCCACT GGAGGTGGGA 960
TGTATGTCCT CTCCCCTTGA ATCTGTGCTG GGACTCACTT ATAACCAATA GGATGCAACA 1020
GAGATGATGT CGTGGGTGGT GTCAGAACTC TTTGACATTT GCTGCAAAAT GTGAAGCCTA 1080
ATGCCGTTTC CCTTGCGTGT GACCTTGGTG ACTCATTTCT AACAAATAGA ATTAAGTGAA 1140
AATGATGGGG TATGACTTCA GAGACTAGAT TATAAAAGGC ACTGAAGCTT CCTGCTCTCT 1200
CTCTCTATCT CTATCTCTCT CTCTCTATCT CTGTCTCACT CGGTTCTTGG GGAAACTGGC 1260
TGCCATGCTT TTAGGATACT CAGGCAACAC ATGGAAGGGC CCATACAGTG AAGAACTAAG 1320
GCCTTTTGTC AACAACCCTG AGGAACAGAA GCTTCCTGCC AATAGCCATG TGACCGAGTA 1380
TCTTGGAATT AGATCTTCCA GCACCAGCCA AACCTTCAGA TAATTGTAGC CCTTGCTGAT 1440
ATATTGACTG CAATCTCACA AGAGGCCTTG AGTCAGAGGC AGCCTGCAGA GGCACTTCTG 1500
AATTCCTGGC CCATAGACAC TGTACAGTCC TAAAGGTTTG TTGTTTTAAG CTGTTAAGCT 1560
TTGAGAGAAT TTGTTATGCA GTGATAGATA ACTAATACAC TCTGCTCTTT CTGAAGCTAG 1620
GTCAGGAAAA GCATTGAGTT TCTGCCTGGT TCCCTCCCCT TGGATCTGAG CCTTGAATGT 1680
AACTGGCTTG CAATCAGTCC AGCAATAGTG ATGCCTTAAT TTTTGAGGTT GGATCAGAAA 1740
AGGCCGTGCG GCTTCTGCCA AGTATTCAGG GACACTCCCT CTGGGAGAAG TCAGCCACCG 1800
TTTAAGACAT TAGATGCCCT GAGATTGCCA CGTGTAGGTG CTCTGGCATC TCTGCTGAGA 1860
ACTCAGCAGA TAACCAGTGA CCATCAGTCA TGTGAGAGGA TCATCTGGGA CGTGCAGCCC 1920
AGCCAAGCCT GCAGATGACT CCAGGCTCAG CCAACATCTC ACTGCAACAA ATAAGAGACC 1980
CCCGGCAAGA ACCACTCAGC TAATCCCTTC TTGAATTCCT GATCTATGAA ATCATGAGCA 2040
AAATAACATA GTCATCCTAA GACACTGTGT CACACAGAGA TAGCAACTGG AGTAGTCAGC 2100
CTTTGAAGAA 2110
|
