| Tag | Content |
|---|
EnhancerAtlas ID | HS117-05755 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr5:172163730-172164320 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr5:172163827-172163847 | CCCCCCACCCCCCACCCCCA | + | 6.69 | | RREB1 | MA0073.1 | chr5:172163824-172163844 | CCACCCCCCACCCCCCACCC | + | 7.47 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_01555 | chr5:172161575-172164468 | Aorta | | SE_25789 | chr5:172159073-172164794 | Duodenum_Smooth_Muscle | | SE_26519 | chr5:172161539-172164407 | Esophagus | | SE_27813 | chr5:172162616-172164528 | Fetal_Intestine | | SE_28860 | chr5:172163051-172164514 | Fetal_Intestine_Large | | SE_29599 | chr5:172163056-172163823 | Fetal_Muscle | | SE_29599 | chr5:172163834-172164526 | Fetal_Muscle | | SE_36923 | chr5:172158609-172169465 | HSMMtube | | SE_51114 | chr5:172162998-172164841 | Skeletal_Muscle | | SE_52323 | chr5:172162857-172164502 | Skeletal_Muscle_Myoblast | | SE_55017 | chr5:172158439-172165274 | Stomach_Smooth_Muscle | | SE_64135 | chr5:172162857-172164516 | HSMM |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I172731 | chr5 | 172158084 | 172164494 |
|
Enhancer Sequence | TCTCTCTCTC TGAGAAGTTC CTTTGCTCAG CAAGGCTGTC GGGGGCACTG GTAAAGGTTG 60
GGTGCTGGGT CTTGGCTCCT TAGCACCCCA CTTCCCACCC CCCACCCCCC ACCCCCAGTG 120
ACTCTGGCAG CGGATGTGGG GACACCGAGC CACAGGGATT CTCAGCTGTC GCTCGACACA 180
GCGGATCCAG GGCCCTTATT TAGAGCCTTG GCTCAGGGGG CTGGGGGAGA CGCTCTCTGT 240
CCCAACAGTA ATTCCCTTGC TCTCCCCACC TCCTCACCCT CCTAGGGGTG GGGCTCAAGA 300
ACTCAGACTC CCCAGCCTTG GGCCTGGGCT CAGAACCTTT CCTGGGCCCT TCCAGAAACC 360
CTCCCTGCCA CCGGCTGACC AGTGGCCTGG ACTCCTGCAT TTAGTGGCTG CTGCAGAGTG 420
AGTTAGTGAC CTGGAGAGAA GGAAATAGAG GCTCCCTCTG GAAGGGAGGT GTGTTATGAA 480
AGTGTTTCCC TCTGCTGGGA CACCCAGACC CCTACCAGTA TCATTGGACT TGAACACCAC 540
GTTAGACAAC ATGTGTCTTC ATACGAATAC ACATAACATA GCAGACAGCC 590
|
