Tag | Content |
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EnhancerAtlas ID | HS117-04239 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr20:33898720-33900410 |
Target genes | Number: 10 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF5 | MA0599.1 | chr20:33899414-33899424 | GCCCCGCCCC | + | 6.02 | Lhx3 | MA0135.1 | chr20:33899281-33899294 | ATTTAATTAATTT | - | 6.07 | MAFK | MA0496.2 | chr20:33899426-33899445 | ACTTGCTGAGTCAGAATCT | - | 6.02 | MAFK | MA0496.2 | chr20:33899426-33899445 | ACTTGCTGAGTCAGAATCT | + | 6.4 | NFAT5 | MA0606.1 | chr20:33899269-33899279 | ATTTTCCATT | + | 6.02 | NFATC1 | MA0624.1 | chr20:33899269-33899279 | ATTTTCCATT | + | 6.02 | NFATC3 | MA0625.1 | chr20:33899269-33899279 | ATTTTCCATT | + | 6.02 | YY1 | MA0095.2 | chr20:33899362-33899374 | CAAAATGGCTGC | + | 6.52 |
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| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_02275 | chr20:33898668-33901023 | Astrocytes | SE_26824 | chr20:33900150-33900518 | Esophagus | SE_36174 | chr20:33898711-33901136 | HMEC | SE_44275 | chr20:33899328-33901022 | NHDF-Ad | SE_44962 | chr20:33898643-33901548 | NHLF | SE_45807 | chr20:33898571-33901706 | Osteoblasts | SE_51781 | chr20:33898758-33900913 | Skeletal_Muscle_Myoblast | SE_55706 | chr20:33898658-33904602 | u87 | SE_63567 | chr20:33898744-33900927 | HSMM | SE_64842 | chr20:33898710-33901046 | NHEK | SE_67595 | chr20:33898658-33904602 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 33899361 | 33899545 | chr20 | 33899339 | 33899479 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I035310 | chr20 | 33898708 | 33901718 |
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Enhancer Sequence | TCGAACTCTT GGCCTCGTGA TCTATCCACC TCGGCCTCCC AAAGTGCTGG GATTACAGGC 60 GTGAGCCACT GTGCCTGGCC AGCTGCAGAT TATTCTAAGC AAGAGAAAAT ATTCAAAATA 120 TTTACAGAGG GAGTGCCTAC AAGGTACACC AGGCCCTGAA CCAGACCCTA AAGCTGACCA 180 AGACTCAGCT ACTGCCCTCA ACCCCTCATT GTTAGGTAGA GTCTCAGTCA GGCACAGCAT 240 GTCTATAGGG CAGTAAGGCA AACGGCCTAA GAGAGAGCAC AAGAAATATA AAGGCAGATA 300 GGGCACATAG CAATGGCAAC AGTTCACAGA AGGCCTGGAA GTTCAGGGAG CAATTTGGAC 360 CTAATGTCAC AGAAAACAGG GAGGTTCCCA AAGCGTCCAG GGAGGGGGAA CAATCCAAGC 420 AAGATTCTAG GAAAAGGTTG CTGTAGAACA GCGCTGTCCA ATAGAACTTT TTGTGACTAT 480 GGAACTGTTC TGTATCTGCA CTGTCCAAGA TGGTAGTCAC ATATAGTAAC TGAGTACCTG 540 AGGATCTGAA TTTTCCATTT TATTTAATTA ATTTAAATTA AAATAGCTGC ATGTGTTTAG 600 TATCAAATAG CTCTAGCACC TTGTGACTCC AAGTGTGGTC TGCAAAATGG CTGCACCCCC 660 ATCACGTGCA GCTGTTAGCA ATGCAGAATC TCAGGCCCCG CCCCAGACTT GCTGAGTCAG 720 AATCTGAATT GTACCTAGGT CCTCTAGGTG ACTCACATGC ACATTAAAAT ACAGGAAAAA 780 CTTCTAGAAT TGCACATTAA AATCACCTGG GAACTTTTAC AACTACAGAT GTCCACCTCC 840 ACCAATTAAA TCAGAATCTT TGGGGGACAG GGCCCAGACA CTGATATTTC TAAAAAGTGT 900 CCCAGGTAAT TAGTATATTT CCCCAAAATT TCCTGCTCTT AAAAGTCACC TTCGGGTGAC 960 TTGTTGAACC ACCAGGCAGC ACTCCTACTG AATTGTAATC TTCAGAGAGG TGATAAAGAT 1020 TTAGATTTTA AAAGCACCCC AGGTGACTCC TGTGGTCAGG CACAGTTGGG TAAAATGGCT 1080 CTGCCAGAAT GGACTGGATG GGGGACCGGA AACAAACACA ATTCGGTACA TTTTTATTAA 1140 TACTGATGAA AGGATCGACT GAGCCAATAG AGCCACCTGC AATAAAGACC ATAAACAAAG 1200 GCTCACAGAG AGGTGTAGTT CTTCACTCCT AAGCCTCATC CTTTTCTATA TTGTAAGGCT 1260 TCTACAATTA CAATTCGTCC ACTTTTATAA TTGATATGTA CACTTGAGCA ATAATTCTCA 1320 ATTCCCAACC CATAACCCCC GAAAGCTCAT GTTAAGTTAA TGATGTGTAT AGTATGCAAT 1380 GTAAATGCTC CCTTGTAATT CAGGATATCC AGTAGAATAG GAATCAGGAG ACCCTATTTT 1440 AACAAAAGTT AAGAAACTGA ACTCCAGTTT CTTAACTTTT GTCCTTTTAT GCATTTCTCA 1500 CTCTTTGACT ACCACATGCC AAGCACTATG CCAGGCCACA GAAATGCAAA CACAGTAGGC 1560 ATTGCACTAC CCAAAAAGAA ATCCCCACCC AGCCAAGGTG ACAGATAATG TGAATGTAGT 1620 AAGCACTGTG AGAGTGCAGG GAGGATGGAA TGAGCTGAGT CACAGGAAGT TCAGGAACCG 1680 CTTCCCAGGA 1690
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