| Tag | Content |
|---|
EnhancerAtlas ID | HS117-03668 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr2:55336420-55337950 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxa2 | MA0047.2 | chr2:55336776-55336788 | TGTTTACTTTGT | + | 6.18 | | Rhox11 | MA0629.1 | chr2:55337497-55337514 | AAGCAGCTGTAAAAGAA | + | 6.11 |
|
| | Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
| SE_00239 | chr2:55335449-55341307 | Adipose_Nuclei | | SE_03190 | chr2:55336259-55337120 | Brain_Angular_Gyrus | | SE_03921 | chr2:55334386-55337549 | Brain_Anterior_Caudate | | SE_04845 | chr2:55334069-55343673 | Brain_Cingulate_Gyrus | | SE_05873 | chr2:55336098-55342734 | Brain_Hippocampus_Middle | | SE_06720 | chr2:55334097-55353338 | Brain_Hippocampus_Middle_150 | | SE_07801 | chr2:55334319-55343521 | Brain_Inferior_Temporal_Lobe | | SE_13769 | chr2:55337425-55341267 | CD34_Primary_RO01536 | | SE_14856 | chr2:55335589-55337372 | CD4_Memory_Primary_7pool | | SE_26467 | chr2:55333970-55337647 | Duodenum_Smooth_Muscle | | SE_30501 | chr2:55336280-55337153 | Fetal_Muscle | | SE_33603 | chr2:55333933-55341699 | H2171 | | SE_37014 | chr2:55332846-55341638 | HSMMtube | | SE_39897 | chr2:55336330-55337321 | K562 | | SE_45296 | chr2:55336226-55337212 | NHLF | | SE_45296 | chr2:55337335-55337891 | NHLF | | SE_46551 | chr2:55336120-55341289 | Osteoblasts | | SE_49902 | chr2:55335332-55337311 | RPMI-8402 | | SE_51987 | chr2:55335845-55337652 | Skeletal_Muscle_Myoblast | | SE_54907 | chr2:55334155-55341221 | Stomach_Smooth_Muscle | | SE_56652 | chr2:55336443-55341447 | u87 | | SE_63794 | chr2:55333885-55337642 | HSMM |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH02I055106 | chr2 | 55333325 | 55341394 |
|
Enhancer Sequence | CAGCCTGAGC CCTTCAATAA TTAATAGATG CAAAGTTAAA GAAATGTCAA TGCTGATAAT 60
AAATTGCTCA GGGTGACTCA AATGCAGCTG CTTCTCTGCT GATCACTTCT GGTATTAACT 120
GTGCTTACAA AAGCAAATAC CTCATACTCC TTCCACTCTA TAGAAAAACC AACAGGTACA 180
GTATCACGTA GCTAGGTAGG CCTTGAATAG AAAAAAGGGT AACTCAGCTT TGACAAGGAC 240
ATTTATCTCT GGAATTTCTG TCCTCTGAAA ATATTTGTTA CTGATACTCA CTTGCTATGC 300
CCCAATTCCC TGATTCTGCT AAAACACCTT TTAGAAAAGG AAGCACTGGA GCAGGGTGTT 360
TACTTTGTTG ATGCTCTGGA GCAAGGGGGT GTTACTGTAT ATGTTCCATG TTAGGGGTTT 420
GTCCAAGAAA AAGGAGCAGA TGGCTAGTGA CTCAGAGCAT ATGTTGACCC GAGTGCCCTT 480
TGGCAAACAG GAGCTCCAGG CAGAGAGTAA ATATGCCCTA AATATTTGAA AAAGGGAATC 540
ACTCAGCCAA GAAAAGAGGA GTCTGAGGGA GCACCCTAAA ACAATCTTAG CCTTGTAGAG 600
GGATATTATT TATTCCCTGG GGAGAAAACT GTTTCTCTCT TCCAAAAAAG AGTGGACATT 660
GAATTTATAT TCAGAAGTGG TAAGAAAAAT AAGGGAAGGA TGATAAATAG TGAAAGGAAC 720
AAAAGAAATT CTGGAATCTC AGGGCTGGGC GTGGTGGTTC ACACCTATAA TCCCAGCATT 780
GTGGGAAGTC GAGACTGGTG GATAGCTTGA GCCCAGGAGT TCGAGACCAG CCTGGGCAAC 840
ATGGTGAAAC CCCATCTCTA CCCAAAAAAT ACAAAAATTA GCCAGGTATG GTGGCCTATG 900
TCTGTAGTCC CAGCTACGTG TGAGGCTGAG GTGGGAGGAT TGCTTGAGCC TGGGAGGCAG 960
AGGTTGCAGT GAGCCGAGTT TCTGCCACTG CATTCCAGCC TAGGTGACAG AGGGAGACCC 1020
TGTCTCAAAA AAAAAAAAAA AAAAAAATTC TGGAATCTCG TGCCTCTCAT CAATAGAAAG 1080
CAGCTGTAAA AGAAGCAGAG GCATAGCCCA AATGGCCCCT GAGTACCCCT TCTCACCTTC 1140
CATTTCCTTA GAATGGTAGA TATTTGCCCA AGGTTACAAT AATATCAAAA CAAACAGAAC 1200
AATCAGGAAT ACCCTATGAC ATATCACAGC CAATAAAGGC TCAAAAAATT CTTGCTGATG 1260
AAGAAAACAA ATGTTCCCAA ACAGCATTTC CTGGTTACTT ATCAATAATG CAGACCAATG 1320
TCAATCTATC TGAGGGCGCA TATACGTCCA TTTGGATCCT TTAAAAAAAA CTGTCTCATT 1380
CTTTAAATAA ATGTCAAGGG TGTTTACTCC AGAAATAAAA TAGAAAGCCA ACCTCAAATC 1440
AGGAAAAATA CAGATTAAAA ATATATCTAC GCCAGGCCAG GCACGGTAGC TCATGCCTAT 1500
AATCCCAGCA CTTTGGGAGG CCAAGGCAGG 1530
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