| Tag | Content |
|---|
EnhancerAtlas ID | HS117-03233 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr18:57549000-57550150 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| MEF2A | MA0052.3 | chr18:57549868-57549880 | CCTAAAAATAGA | + | 6.14 | | TBXT | MA0009.2 | chr18:57549948-57549964 | TCACACATTGTTGTGA | - | 6.12 | | TBXT | MA0009.2 | chr18:57549948-57549964 | TCACACATTGTTGTGA | + | 6.2 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_32577 | chr18:57548925-57550191 | GM12878 | | SE_58839 | chr18:57500446-57596675 | Ly3 | | SE_61147 | chr18:57502462-57596007 | HBL1 | | SE_61632 | chr18:57500930-57592089 | Toledo |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH18I059880 | chr18 | 57548203 | 57550714 |
|
Enhancer Sequence | ACAGCAACAT CCCTCAGGGT GAGTTATGAC CCAGGCATCA AAGGAGGCCA CCTCAACGCC 60
CAGCTGCCAG GAGGAACATG ATAGTCAAAG GAAAAAACAA GGGTGGGGCC CGTGTGAAGA 120
GGCAAAATAT ATTCTCACTT TCATCAGGAG CTAGGATCGG CTGGGTGGAT TACCCAGCCC 180
TTGGCTAGAG TTCTGGAGGA TTCAGATTAG AGATGCTGGA TCAAAACAAC GGAAGAAAAG 240
GCTGTACAGA GCCATTCTGT AAACACAGGC CAAATTTTAC TATTTGCTGC TCTACCTAAT 300
GTTGTGATTA CTACTGAGTG CTTCCTCTCT TTGTTTGTTC TTCTGAGCCA ACCTTTGTCC 360
TCTCTGCCTA GACACTCATT TTCCTGGTAG GACACTCTGA GTTCCGGAAA GACGACAAGA 420
TGAATAACTA AGGCTCAGGG AGAGATAAAT ACTGCCCCGT CTGCAAAACC ACAATGCCTG 480
GCAACCACCT AGAGCCCCAC ACTTGGAAAC AGAAAGAAAT CCTGGGGTTT CTAGAAACCA 540
AACCCACTGG GACCATACAA CTTCAGACAA AGCTGTGGCC TCACTTGAGC ATAGCTTACA 600
ACTCTCTAAC GTTGATCACA GCAGAAGCCC CATGGCCATA TGTACTGTAG CAGTTGGGGA 660
GGGCGTGAGG TGGAAAAAAA AAAGTTTAAA AAAAAAGTTT CCATTCTTTT GAAGCCTGAG 720
TTGAAATAAG GAGAGGGGAA GAAGCTGAGA AAAGCAGGAA CTAATCGGGC AGCTGACTCA 780
CAGGGGCAGA ATCTCAGGTT CATTTGCTCT CAGCAGAAAA TTATCTCTCT CCAGTCAGTT 840
CCACTGTTTT CACTCATCGA GCTGATAGCC TAAAAATAGA GATTAATGTG GAACATTATC 900
TTTTAAAAAT GCACCTCCCT CTGGGAATGG TAATAAGCCA TCAGCCATTC ACACATTGTT 960
GTGAATTAGT TTAATTTAGT GAGTGGGAAT TAGAATGGAG GAAATTTAGA AAGTAAGTAA 1020
TCAGCCTTTA TTTAACACAT GAGGAAATCA TGGTCCAGAG ATGGGAGCTT CTGGGCTTGA 1080
GCTCGCACAG AAGGTAAACA GCAAACAGAG TTAAACAGCA ACTACTACTC TCCCGGGTCT 1140
CCTGTGAGAT 1150
|
