Tag | Content |
---|
EnhancerAtlas ID | HS117-00916 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr10:65026690-65028420 |
Target genes | |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF4G | MA0484.1 | chr10:65028025-65028040 | AAAGAACAAAGTCCA | + | 6.36 | IRF2 | MA0051.1 | chr10:65027024-65027042 | GAAAAATGAAAGGCAAAC | + | 6.02 | TEAD1 | MA0090.2 | chr10:65027664-65027674 | CACATTCCAT | + | 6.02 |
|
| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_00727 | chr10:65014644-65030215 | Adipose_Nuclei | SE_11171 | chr10:65014720-65030739 | CD20 | SE_12909 | chr10:65024693-65030001 | CD34_Primary_RO01480 | SE_13393 | chr10:65023813-65030359 | CD34_Primary_RO01536 | SE_14262 | chr10:65024949-65030096 | CD34_Primary_RO01549 | SE_14534 | chr10:65024250-65030163 | CD4_Memory_Primary_7pool | SE_16047 | chr10:65024607-65029830 | CD4_Naive_Primary_7pool | SE_16654 | chr10:65024807-65030144 | CD4_Naive_Primary_8pool | SE_18712 | chr10:65023894-65030237 | CD4p_CD25-_Il17-_PMAstim_Th | SE_21027 | chr10:65024003-65030175 | CD8_Memory_7pool | SE_21755 | chr10:65024563-65030161 | CD8_Naive_7pool | SE_26320 | chr10:65024526-65029935 | Duodenum_Smooth_Muscle | SE_29437 | chr10:65023977-65030121 | Fetal_Intestine_Large | SE_30034 | chr10:65024285-65030089 | Fetal_Muscle | SE_32895 | chr10:65025844-65029727 | H1 | SE_58599 | chr10:65001138-65035511 | Ly1 | SE_60138 | chr10:65015127-65035361 | Ly4 | SE_61804 | chr10:64995154-65034173 | Toledo | SE_62580 | chr10:64984951-65034388 | Tonsil | SE_64796 | chr10:65024753-65030005 | NHEK |
|
Enhancer Sequence | CAAGCCGACC AATGATTTAA ATTATTCTAA GTTAATTTGA AAAAAGGATT TCTAAGCTAA 60 AAAAATTCTC ACGTTTTAAG ATGTCTCATT GAAAGCCAAG TAAAATTTGG CTACCAGAAA 120 TCTAAGAAAA CTAGCTGACA ATGATCAAAT TTGAATACTC TTACAAGGAC ATGAGTACTT 180 ATAATCATTT ACAAGTGGAA GTCCAAAGTA TATCATGCTT CTTAAATAGC AAATAAAAAG 240 TGCTGATAAA TACTTTTATA GTATTTGTTA AAAGAAATGT TTCAATATTT ATTAAATGAG 300 AAACAGTGAA TATGTGTGAC TGCTCTACTT TAAGGAAAAA TGAAAGGCAA ACAACATATG 360 AAGTGATATT AAAATACACC CCGGTTTTTT TAACTGGCAA AACAACCATG TTAAGTATTG 420 CTAATTTTTG TATTAGTCTA GTACATTTCA AAGGAACATT ATAAGTTTAA AAATAATAAA 480 AAACATATTT AAATAAAAAC AAATGGGTCC TACAGCTGGT ATGATGAAAT TTGTAGTAAA 540 TAGTTCATGG GTCTAGGTGC ACTGGAATGT AAAGAAACTA GAACTCATGC ATAACTAATT 600 CAACACTCTA AAGATATATC ATTCTATGAG TAACTTCCAC AGCCTAAAGG GAAGCAATGA 660 GCTAACATCT GATGAAAGTC ACAGTAGAAT ATGGCCCTAA TCACAAAAGA CTATCATTCA 720 AATGCTCTAA AAAGCCTTTG AAAACCAAAA TGAAAATTAC TAACACTAAA TGTTCAGTTG 780 AAACAAAATG CTTTTTCAAT TTTATTAGAG TGAGAGTTTT TTTTAAGGTC ATTTATCAGT 840 GTTAAACATA CTTTTTAAAA ATAGTCTACG GCCAAAATAA ATATAGTTGA GAGCCTGCAT 900 TTCTAGTAGG GCCTACCAAA CTATAGGAAG AATGCTTAGA ACAACTGTAT CCTGTTTGGG 960 GCTCCATGCT GCACCACATT CCATTCACAT GAGGAAGACG CGAACAGATG AGCCCTCCCC 1020 GAAAAACATT TTTAAAATAA ATCAGCTACA GCTCTTAAAC ACAACTCAGC TGCTCAAACA 1080 AACGATGTTA AAGCTCACCA TTTCACATTT AACAGGAAAT TCAAGGAGCT TATGTCTGCA 1140 GTCTTAGTTT CTAACAATCT CCGGTTAACA GTTAACAATT CCAAGTTAAA AAAAAAAACA 1200 GGCTTATTAA CTGCAAAAAT ACTAATATAA ATCTCACCAA AGGTAAATAC TAAAGCAGAA 1260 AACAACCTAA GCAACATTTT AGAAGTTAAG ATTTAGTCTA CCAAAAAAAA AAAAAAAAAG 1320 GACTGGAGTG ACTTGAAAGA ACAAAGTCCA AATTCCCACC CAAGCAGGTC TATTGAAAAA 1380 CACGATACTG TTAGAAAACA AGTTGGGGGT GGGGAAGGGA ATAACCAAAA AAAAACCTTA 1440 CAAAACAAAT ACCCCCACTT TCCTTGAAAC ACTAGTCTGA AAATCCTAAT TTGAAGCACT 1500 TCTGCCATAA TACTTTAAAC AATTAAACTC GTTTTTTAAC ATTTACAGTT ATTAAATTAC 1560 TACAAACACA ATAAACCTTT TTAAACAAAT GAAAGTTAAA AATTCTTAAA ACTAAAAACA 1620 TTGAGGCCAG ATCTTTTATA AAAGGCAGTG ACCTTAATTT CTCAGGCTGA GAAGAAAAAC 1680 CAAATGTAAA TTAAGACAAA AGAAAAAGGA AGCAGAAAAA TACAAACCGT 1730
|