Tag | Content |
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EnhancerAtlas ID | HS117-00829 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr10:17067620-17069050 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RFX1 | MA0509.2 | chr10:17067775-17067791 | TGTTGCTATGACAACT | + | 6.38 | RFX1 | MA0509.2 | chr10:17067775-17067791 | TGTTGCTATGACAACT | - | 6.38 | RFX2 | MA0600.2 | chr10:17067775-17067791 | TGTTGCTATGACAACT | - | 6.26 | RFX2 | MA0600.2 | chr10:17067775-17067791 | TGTTGCTATGACAACT | + | 6.4 | RFX5 | MA0510.2 | chr10:17067775-17067791 | TGTTGCTATGACAACT | + | 6.21 | RREB1 | MA0073.1 | chr10:17068155-17068175 | CCCCAAACAACCACCACAGC | + | 6.67 | RREB1 | MA0073.1 | chr10:17068154-17068174 | ACCCCAAACAACCACCACAG | + | 6.73 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_00693 | chr10:17064124-17068088 | Adipose_Nuclei | SE_02279 | chr10:17063748-17069478 | Astrocytes | SE_09959 | chr10:17063329-17070260 | CD14 | SE_12360 | chr10:17064454-17070140 | CD3 | SE_16659 | chr10:17064314-17070250 | CD4_Naive_Primary_8pool | SE_17226 | chr10:17064697-17070025 | CD4p_CD225int_CD127p_Tmem | SE_18814 | chr10:17064341-17074249 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19922 | chr10:17064493-17072796 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21442 | chr10:17066882-17070160 | CD8_Memory_7pool | SE_26240 | chr10:17064115-17068562 | Duodenum_Smooth_Muscle | SE_29863 | chr10:17067617-17068400 | Fetal_Muscle | SE_37595 | chr10:17064302-17069938 | HSMMtube | SE_38004 | chr10:17064380-17073255 | HUVEC | SE_44159 | chr10:17063596-17072780 | NHDF-Ad | SE_44819 | chr10:17063898-17069691 | NHLF | SE_45725 | chr10:17063483-17070392 | Osteoblasts | SE_47324 | chr10:17062926-17069482 | Panc1 | SE_55749 | chr10:17063010-17072777 | u87 | SE_63635 | chr10:17064588-17069776 | HSMM | SE_67629 | chr10:17063010-17072777 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH10I017021 | chr10 | 17063281 | 17072895 |
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Enhancer Sequence | GAGAAACCAC CCAAAATAGC TATGAGAAAA GAAAGATGTT GGGGATTAGA GAACAGGAGC 60 TGACTCACAT AAAAGAGTTC ACAGAAATCG TCACTGGTAG GGCAGATGGG GAAGTGATGA 120 ATTCAGTGAG GAGGTGGAGG CCAATCCTCG CAGTGTGTTG CTATGACAAC TTGGGCATTG 180 TGGAGACTGA GGCATCCCGG ACAGCCATGC AGAAACCAAG GCGAATCATC CTGTGTGGGG 240 TGGAGATAAG CATGCTGTGT GTGTGGAAGG GATTGCGGGA GGACAGATCA TGCAGGGGAC 300 AGCAGCAAAG AGAGTTAGGA AACCAGAGGC TGTTAAGGCT GCCACGGTGA GGTGGATAGA 360 GTCCACTGGC AAGCAAAGTG GCTCTCATGC TAAAAGTGAG CAGCATCTCT TCCTGTTGCA 420 GCCTCCCTTC CCCTTTGGGT CCTACCCAGC CCTGTAGTTC CTGCTGCTGA ATCACTGGAG 480 ATCCAGAAGG ATGGGACCTA GGGAATTCTC AGGGCATCTG CTCAGATGTT CCCCACCCCA 540 AACAACCACC ACAGCAGGAT CTGTGGAGAG GCCTCATTAG GGTGATTGTT AAAAATGTTG 600 TTGCTGAGGT TTGCACTCAC ATCTCCTGGA AAAACTTGGA ACTTTATCCA AGTTCAGGTT 660 ACTTTAAATT TGAAGGGCTT TGAAATGTTC CTGTAACAAC AGTAGAAATT GCAAAGCAAG 720 AATCACAGAG GCTGGTTGTG GTGGCTCACG CCTGTAATCC CAGCCCTTAG GGAAGCCGAA 780 GCGGGTGATC ACTTGAGGCC AGGAGTTCAA GACCAGCCTG GGCAACATGG CAAAACCCTG 840 TCTCTACTAA AAATATAAAA AATTAGCCGG GTGTGGTGGC GTACGCCTGT AGTCCCAGCT 900 ACTTGGAAGA CTGAGGCAGG AGAATCACTT GAACCCCAGG AGGTGGAGCT TGCAGTGAGC 960 CGAGATCGCA CCACTGCACT CCAGCCTGGG AAACAGAGCA AGATTCTCTC AAAAAAAAAA 1020 ATAAATAAAT AAATAATAAG AATCACAGAG GAGATACAGC GCTTCCATTG TGGATAAGCA 1080 AAGCCCAAGG GGGCAAATGC AAAATCAAAT CATGGTGGAT AAATGAGGCA AATGTAGAGG 1140 AAGGCTGATA AGCAGAGCAT GGTTGATCCC AGCCGACTCC AAGATGGCCC TTGGGAGGCT 1200 AAGTCCCCTC CATAAGGCAC ATGGCCACTC ATAGCATGCT CCCTGACATA GGCACAGAAA 1260 AAGCCGCCTT GCCATGTGCT GACAGGGTGG GGCAGGAAAT ATGAAATATC ATCTAAAAGT 1320 AACAATTACT CATAATGTTG GGCTTTGCAT GAGAGCAAAA AACCCATCGA AATACCACAT 1380 TTTGAGTTAC TTGGTGTCAC CCTGAGTTAC AGGTCTGTCT CATATAAAAA 1430
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