| Tag | Content |
|---|
EnhancerAtlas ID | HS117-00741 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:235090720-235091790 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NR2C2 | MA0504.1 | chr1:235091354-235091369 | AGGGGGCAGAGGGCA | + | 6.63 | | Six3 | MA0631.1 | chr1:235091720-235091737 | GCAAATGATACCCTTTC | - | 6.12 | | ZNF263 | MA0528.1 | chr1:235091129-235091150 | GGAGCAGCTGGAGGAGGGGAG | + | 6.02 |
|
| | Number of super-enhancer constituents: 44 | ID | Coordinate | Tissue/cell |
| SE_00182 | chr1:235089787-235092321 | Adipose_Nuclei | | SE_00983 | chr1:235090315-235091537 | Adrenal_Gland | | SE_01666 | chr1:235090775-235091665 | Aorta | | SE_02305 | chr1:235090797-235091817 | Astrocytes | | SE_04136 | chr1:235091089-235091897 | Brain_Anterior_Caudate | | SE_07547 | chr1:235089887-235092129 | Brain_Hippocampus_Middle_150 | | SE_09160 | chr1:235089274-235102029 | CD14 | | SE_13412 | chr1:235090132-235091861 | CD34_Primary_RO01536 | | SE_14852 | chr1:235090111-235096258 | CD4_Memory_Primary_7pool | | SE_19577 | chr1:235090565-235091808 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_21117 | chr1:235090472-235092194 | CD8_Memory_7pool | | SE_23314 | chr1:235090805-235091803 | Colon_Crypt_1 | | SE_23955 | chr1:235090824-235091497 | Colon_Crypt_2 | | SE_25800 | chr1:235089687-235101859 | Duodenum_Smooth_Muscle | | SE_26806 | chr1:235090349-235091700 | Esophagus | | SE_27663 | chr1:235089063-235101555 | Fetal_Intestine | | SE_28576 | chr1:235088850-235101396 | Fetal_Intestine_Large | | SE_29689 | chr1:235090283-235092133 | Fetal_Muscle | | SE_31235 | chr1:235090341-235091774 | Fetal_Thymus | | SE_31572 | chr1:235090061-235091822 | Gastric | | SE_32492 | chr1:235088942-235092206 | GM12878 | | SE_36952 | chr1:235089804-235094553 | HSMMtube | | SE_40653 | chr1:235089852-235091891 | Left_Ventricle | | SE_42265 | chr1:235089721-235091735 | Lung | | SE_44805 | chr1:235090559-235091810 | NHLF | | SE_45558 | chr1:235090190-235094180 | Osteoblasts | | SE_47119 | chr1:235087515-235103374 | Panc1 | | SE_47599 | chr1:235090912-235091521 | Pancreas | | SE_48697 | chr1:235089896-235091719 | Right_Atrium | | SE_50071 | chr1:235089709-235100691 | Sigmoid_Colon | | SE_51271 | chr1:235089831-235092066 | Skeletal_Muscle | | SE_51773 | chr1:235090507-235091828 | Skeletal_Muscle_Myoblast | | SE_52352 | chr1:235089712-235101497 | Small_Intestine | | SE_53330 | chr1:235089854-235092349 | Spleen | | SE_54553 | chr1:235090275-235096009 | Stomach_Smooth_Muscle | | SE_56068 | chr1:235090847-235091959 | u87 | | SE_56760 | chr1:235090862-235091499 | VACO_400 | | SE_59259 | chr1:235089283-235124733 | Ly3 | | SE_60969 | chr1:235059965-235155853 | HBL1 | | SE_61435 | chr1:234961094-235124239 | Toledo | | SE_62329 | chr1:235047040-235185428 | Tonsil | | SE_63542 | chr1:235090473-235091948 | HSMM | | SE_65393 | chr1:235090044-235091867 | Pancreatic_islets | | SE_67736 | chr1:235090847-235091959 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I234953 | chr1 | 235089124 | 235101946 |
|
Enhancer Sequence | GTAAAAGGAT AAAAGAGTCA GAAGGAGTTT CAGAATCTAA GAGCTCCAAA AATAAACCTT 60
TCCCTTTGTA TCACTTTTCT CTTTTTACTT TAGTTGCTCT CAACTTGCTG CTTCCTTTTT 120
TTAAAAATTC TAGCAATTCT GCAGGAAACC AGAAGTGTGA ACCAAACACA GTAACTCTAG 180
GTGTTATGGC GCTGTCCTGC TCACCCTTCT TTTGGCCTAC TGGCTTCAAA GGTAGGCACA 240
CACACCGTCC CTTTTCTAAT GATCCGGTCG TGGATTCAGG CTCAGTAAGC CAAGACCACA 300
AGCAACAGGG CTTGGGCTCC ATCTGCCTCG GCTGCTTGCA GCTGCCTTCC AGGAAGTGCT 360
GGAACAGCAG AAGCAGCTAG CAGTGCGCTC AAGAAGTGGT CAGCAGTTGG GAGCAGCTGG 420
AGGAGGGGAG GCCAGTGAGC AAGTATCAGC TTGGGAAATA GGGTTTCGGC TGAACAAAGT 480
TCACTGCTGT TTTCTGAGAA AGCAGAACCT AGTGGAGCCA CCCTAGAGAA TAAGGAGAGG 540
AGCAACTGGA ACTGAGTGTT GGCTCCAAAC TTCCACGGCA TGATATGCTT GGCCACCCAA 600
TTGTGATCAG GGCCATTGTT GTTCCCCTGG GGGCAGGGGG CAGAGGGCAG GCCGCCGCTC 660
GGAGTAAAAA GGGAAGACAG ACAGGCAGTC CAAACACCAC CAAATGACAG AGATGCAGAC 720
CAAGACAAAA GGAAAAAACA ACAGAAGGGA TTTTTGTCCT TGAGACGTGC TATGCAAATT 780
CTTTTCAATT AGTTTCCTAT TAATGATTCC ATCTTGAACA TTTAGAGCTG CTCAACCCAG 840
GCAGCATCTA CGTTTTGAAG TAGTAAGTTC TCCATTCCTA GCAGAGTCGG AGGAGAAGCT 900
CAGCTGTTAT CCACCAGAAA TTCTATTAAA AGGATGAAAG GTTGAACTAG ATGACTTCTC 960
ATTCTGAAGA CTGTAATTCA GCAGAACTGA CTAATCCCTG GCAAATGATA CCCTTTCTGA 1020
GTATGCATGT GTCACTGAAA GTCACTCAGA CAAACCAGAC TATTTGTAAA 1070
|
