EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS117-00699 
Organism
Homo sapiens 
Tissue/cell
LHCN-M2 
Coordinate
chr1:223959940-223960700 
Target genes
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs12038299chr1223960392hg19
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
ZNF143MA0088.2chr1:223960085-223960101ATCCCACAATGCACTT+6.39
ZfxMA0146.2chr1:223960057-223960071CGGGGCCAGGCCTG+6.24
Number of super-enhancer constituents: 11             
IDCoordinateTissue/cell
SE_03438chr1:223958774-223960204Brain_Angular_Gyrus
SE_04026chr1:223957700-223961124Brain_Anterior_Caudate
SE_05036chr1:223957080-223961150Brain_Cingulate_Gyrus
SE_05972chr1:223957840-223961220Brain_Hippocampus_Middle
SE_07159chr1:223958193-223961165Brain_Hippocampus_Middle_150
SE_07996chr1:223958259-223961152Brain_Inferior_Temporal_Lobe
SE_15098chr1:223957468-223961297CD4_Memory_Primary_7pool
SE_21386chr1:223957565-223961200CD8_Memory_7pool
SE_37727chr1:223957885-223961236HSMMtube
SE_40000chr1:223957792-223961100K562
SE_42269chr1:223958286-223961055Lung
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1223960335223960451
Number: 1             
IDChromosomeStartEnd
GH01I223769chr1223957177223961167
Enhancer Sequence
TGTGAGTCAG CAGGCCCCGC CTTGCTTCTA AGGGGATGGG GGAGGCATGG GGCGGAAAGG 60
GCTGTTACTT GAGTGATCTG CTTTTTCAAG TTTTGCTTTA AAGAGCTCTT GGTCTGTCGG 120
GGCCAGGCCT GTAACCGGTT GTAAGATCCC ACAATGCACT TTTACTTGCA GTTGTTTTCC 180
AACCACCTAT TCTCAAGTCC AAAATGCACG CCTGGCTCCC TCTTCTCATG AGCTTTGACT 240
TGAGTGTAGC TCAAGGTTAA ACTAAGGAGT GGCTGCAGGA TCATGCTTAG AAAAATGAAC 300
TCCTGATTAG CATGCAAGGG AGAACATGTT TATATAAAGA AATCCTTCAG CTGAAATTCA 360
AGTTGGGTTT TGGGAAGATC CATCATTCTT AGAGTGGATC TACTTAAAAT ACTTTAAGCA 420
AATTAGTTTT CTCTACTCCC TCCCCGTTTA AGATAAAACC AATACTAGTA AATACGTTTG 480
CCATTTATTA TTGTTATTGC ACTCATGTGT CTGGAACCCT AGCAATACAC ATCTCTGAAA 540
TGATCATCAA TCTGAATTAA GTGGGTATGC TAATTTCACA AAAAGCAAAG CGTAAAATGT 600
TCTCGTGTCA TCCCAATGAC AGGAAGTTCT CTCACTGAAA GAAAGAAGCC AGGTGGGGTA 660
TACTTCCATT ATCACCTGGC TCCAGTCAGC ATTTCCTCTA TACTCAGGGA AGGCCACAGA 720
GGGCCGGGCG AAGTGGCTGA CACTGGGTGA GAATGGCAGT 760