EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS117-00696 
Organism
Homo sapiens 
Tissue/cell
LHCN-M2 
Coordinate
chr1:223903260-223904660 
Target genes
Number: 10             
NameEnsembl ID
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
TP53MA0106.3chr1:223903596-223903614TGCTTGCCAGGGCATGTT+6.17
TP53MA0106.3chr1:223903596-223903614TGCTTGCCAGGGCATGTT-6.32
Number of super-enhancer constituents: 37             
IDCoordinateTissue/cell
SE_00224chr1:223891886-223912166Adipose_Nuclei
SE_01908chr1:223903739-223904850Aorta
SE_02306chr1:223899487-223903687Astrocytes
SE_04026chr1:223903291-223905474Brain_Anterior_Caudate
SE_05036chr1:223902343-223904766Brain_Cingulate_Gyrus
SE_05972chr1:223899184-223905867Brain_Hippocampus_Middle
SE_09681chr1:223899395-223907924CD14
SE_19702chr1:223899422-223907008CD4p_CD25-_Il17p_PMAstim_Th17
SE_23408chr1:223902389-223903605Colon_Crypt_1
SE_23408chr1:223904046-223904670Colon_Crypt_1
SE_24051chr1:223903089-223903543Colon_Crypt_2
SE_24051chr1:223903970-223904550Colon_Crypt_2
SE_26209chr1:223899230-223905388Duodenum_Smooth_Muscle
SE_26925chr1:223899336-223904834Esophagus
SE_31491chr1:223898405-223906097Gastric
SE_33950chr1:223900271-223904290HCC1954
SE_34545chr1:223899419-223904575HCT-116
SE_34979chr1:223899218-223904777HeLa
SE_36294chr1:223899426-223904613HMEC
SE_37129chr1:223899390-223911201HSMMtube
SE_38254chr1:223899363-223904539HUVEC
SE_38957chr1:223902403-223904692IMR90
SE_42269chr1:223902366-223906841Lung
SE_44530chr1:223900206-223905349NHDF-Ad
SE_44904chr1:223902263-223903610NHLF
SE_44904chr1:223903924-223904809NHLF
SE_45872chr1:223899383-223910101Osteoblasts
SE_50365chr1:223899342-223907084Sigmoid_Colon
SE_51879chr1:223902338-223905051Skeletal_Muscle_Myoblast
SE_53249chr1:223902420-223905033Small_Intestine
SE_55958chr1:223898795-223906601u87
SE_63671chr1:223902338-223906710HSMM
SE_64794chr1:223900231-223904926NHEK
SE_65644chr1:223902687-223903954Pancreatic_islets
SE_65644chr1:223904002-223904652Pancreatic_islets
SE_67677chr1:223898795-223906601u87
SE_68376chr1:223892363-223922876TC32
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1223904365223904567
Enhancer Sequence
TCACAACACT GGCAAGAGTG GCTCCAGTGC CTGGAGCGGG GATTAAAGCA GTAAGTCCAG 60
TGGGGTCCAA GGGCCATGCA GGGGTACAGT GAGGAGAAAG CAGGTGTGAT CCGGGTGGCA 120
CATCAGATCC TTCCAGCAAC CAGTCTGTTA GGAGCAAGGG CAGATGTTGT GAGCCCCTAT 180
GTTTCCCCCA AGAAAATCAA ACCTCTGAGA GGTTTCTCAC TTGCTTATCT TCAGCTGGCC 240
GAACTCAGCC TCAAACCCAT ATGTCCTGTC TCCAAGTTCA GTGACTGTTA TCATCAACTT 300
CTTCAACAGT AATAATAATA GATCACATTT ATGGAGTGCT TGCCAGGGCA TGTTTACATC 360
ATTATCTCAT TTAACACTCA GAACAATCCT CTGTGGTGGG TGTTTTCATC GTTCCCATTT 420
TGCAGGTGAA AAAACTGAGA CTTCAAAAGG TTAAGTGACT TCCCAGGGTC CTACGACCTA 480
CATAATAAGT GGCAGAGCCA GGATTCAAAC CTAGGTTATC AGAATAATGC AGCAAAGCCC 540
AAACCCTCAG CCCCTTTTCA CTGACTGGTA AGACCCATAT TTAATTCGAT GCCCTACATG 600
CCGTGCACAA GTTTCAGTTT TCTGAAGCAT CGCTTAGATG CTTAGGTGTT TAGCACCACT 660
CTGAACTCTG ACTTTTCTAG AGAGGCTGCT AAAGGCATTA GAAAGTTTCT GAAGTATAAT 720
GGAAAAACCC TGCTGGAGTA AGTGCCTGGC ACACTCAGGA TTATCAGTGT GATTCTTTAT 780
AATAAACAGG CTCCCAGCAC CAAGCCCAAT CTATTCCATC AGCTGGATAA GAGCTCTCTG 840
GCAGGCCTTG GGCCAAGCTG GCTTCCTTTG CCTCAGCAGA AGAGCATTCT GATTCTCTCT 900
GCCATCCCCA AAACTGACAG GAGCAGAGAG AAACAAGGCA GAGGCATGAA GGGAATGTCC 960
TCTGCGGCAG ATGGTGCTTC CGGAAGAGCT CCCACAATCT GAGCTAGAAT GAACAGGGGC 1020
TAGATCCAAG TCTCATATAG GCATACTTCT GCTTGACAGA GTGGGCATGC CGAGGGCCGT 1080
TGGGTGGAGG CAGGCGTGTG CAACCCAAGC AGACATGAGA CGCAGCTCCT TCAAGGCAAG 1140
GTTGCCTGAG CCCAGAGAGG CTCAAATTTG TGCCCCAACT TCCTCTGTGG CTTTTGGGTG 1200
GGGCTCTTCA GAATCGAAAC ACACTCAGAG GGCTGCTGAA AGGGCTAAGA AGTGTTCAAG 1260
GTTGGCTTCC ATCAGGCTGC TCATGACAAT GGCCCCTGAG GTTTTAACAC CCTTGAACGC 1320
TTGGTACTAA ATCAATTAGA GGCAGGGCAG GAGCAGAAAG AGTTGGCGCA TTTGATCAGT 1380
AAGTTCCAAT GCCAGTGCTG 1400