EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS117-00502

Organism

Homo sapiens

Tissue/cell

LHCN-M2

Coordinate

chr1:156633840-156635050

Target genes

Number: 14
Name	Ensembl ID

IQGAP3	ENSG00000183856
APOA1BP	ENSG00000163382
BCAN	ENSG00000132692
RP11	ENSG00000229953
NES	ENSG00000132688
CRABP2	ENSG00000143320
RRNAD1	ENSG00000143303
ISG20L2	ENSG00000143319
MRPL24	ENSG00000143314
PRCC	ENSG00000143294
HDGF	ENSG00000143321
NTRK1	ENSG00000198400
PEAR1	ENSG00000187800
ARHGEF11	ENSG00000132694

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_29621	chr1:156629384-156648365	Fetal_Muscle
SE_37066	chr1:156627097-156648542	HSMMtube
SE_40945	chr1:156629243-156641635	Left_Ventricle
SE_42863	chr1:156629223-156641275	Lung
SE_48663	chr1:156629109-156641547	Right_Atrium
SE_51411	chr1:156629535-156641784	Skeletal_Muscle
SE_54003	chr1:156629212-156641500	Spleen
SE_64001	chr1:156630092-156635889	HSMM
SE_68702	chr1:156629456-156635165	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I156656

chr1

156626377

156641724

Enhancer Sequence

AAGCAGAAGG AGAGGGGAAA GAGGGCTCCC AGCAGGGAGG TAGATGGGAG ACCCCAGTGC 60
CATGAGAGAG GAAAGAGAGA GGGCCATGTT TTCCTCTGTG GGCCATTCTT TCTGTCCCTC 120
TCTCTGCTTC TGAGCCAAGC CGCCCCTCCC CTCGTTCAGC CACTTGAGAT TCTCATCCTA 180
GTCTTTCTAA GGTCGGCCTG TAGATTCAGG AACAGAGTAC TTGGGTCCTT TCTTCAGGCA 240
CTCGAGCTGC ATTCAAGAGA CATCCTGTTT TCCCACCTCC CAGGAAGACC CTCAAGTCTA 300
ACTTCCATCT GTCCTGCTGC AGGACCCATC CTGGAACTTA GCTCTCCCCT GTGGGTGGGG 360
CTGGGGGTCC AGTTGGGACC CAGGAGCCTG TGCCCAAGCC CAGAGTCGTC TCAGGTTTCC 420
TGGGCTTAGG TGGGCTTTTT TTCCATCCCC TCTCCCTTCC ATGGGCAGCC TTAGAGAGCA 480
CATTCCAGCT GAAATTAAAT CACATTCCTC TCTCCCTGCT TCATGAGGAT GGCATTGCTG 540
ACAGCAGCTG TGACACCACA GGGTCAAGTG GCAGCAGCTG GTTCCCCAGG GAGGGGCTGA 600
GAAGGGGGCA GGGAGGGAAG TGGAGGACCA GGGCCTGTCT TTGGAGGCAA TAAATGAATT 660
CTGATTCTTT GATCTCAAGA GACCAGAGAA AGAGGCATAG ACCCTGCAGT GGCAGGGATC 720
AAGGTTAGAC CACAGGATGT CCTAGCTGTG TGGGGATGAC CCAGTCCCAG GAAGGCCCCG 780
TGGGGGAAGG AGGTGTCCAG CATCTCTTTC TGAGAGGACA CTGGAAGAAC GCGCTCTCCC 840
CACTCCAGGG CTGGGCTCTC ACACAGACAT TGAGGCTGAA GGAGCCCTTT AAGAGGCCAC 900
GCTCTGCACT CCCTTGGCCA GAGCCCAATG CCTAGGTCTT TGATTTCCTC TGAGACTCTG 960
GTGGCAGTGG CGGCAGGAGC GGCAGCAGCA GCAACGGGAC AGCATCAGGC TGGGTTGAAT 1020
GGAGAGCTCA GCCCCTGACC TCACCCTCTG AGGCGCCTCA GCCTGCACAG CCTTATAAGG 1080
AAGTGCCCCA AACAAACCGA GGAAGCAACC TCCGGCCCCC CACCCGGCCC CACCCCGTCC 1140
AGAAGCTATA TTTACCCAGA GGAGGCCCCA GAATAACCTC CCACTTGTCC TTGCACTGAT 1200
TGGAGGGGTG 1210