Tag | Content |
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EnhancerAtlas ID | HS117-00430 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:144940210-144942760 |
Target genes | Number: 22 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxq1 | MA0040.1 | chr1:144940692-144940703 | TATTGTTTATA | + | 6.32 |
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| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_00089 | chr1:144935120-144945669 | Adipose_Nuclei | SE_02777 | chr1:144940008-144943001 | Astrocytes | SE_03153 | chr1:144940694-144942735 | Brain_Angular_Gyrus | SE_04539 | chr1:144939729-144943969 | Brain_Anterior_Caudate | SE_07393 | chr1:144939676-144942617 | Brain_Hippocampus_Middle_150 | SE_07793 | chr1:144939602-144944108 | Brain_Inferior_Temporal_Lobe | SE_26266 | chr1:144939577-144943976 | Duodenum_Smooth_Muscle | SE_27974 | chr1:144939765-144943462 | Fetal_Intestine | SE_28939 | chr1:144939734-144943426 | Fetal_Intestine_Large | SE_40587 | chr1:144939756-144940602 | Left_Ventricle | SE_40587 | chr1:144940763-144941808 | Left_Ventricle | SE_42105 | chr1:144940808-144941859 | Lung | SE_42105 | chr1:144942237-144942866 | Lung | SE_45013 | chr1:144939845-144943644 | NHLF | SE_45547 | chr1:144939752-144944381 | Osteoblasts | SE_48047 | chr1:144940116-144940776 | Psoas_Muscle | SE_48047 | chr1:144941003-144941827 | Psoas_Muscle | SE_48047 | chr1:144942205-144942687 | Psoas_Muscle | SE_51073 | chr1:144935905-144943062 | Skeletal_Muscle | SE_54547 | chr1:144938208-144944079 | Stomach_Smooth_Muscle | SE_55722 | chr1:144939935-144942996 | u87 | SE_63039 | chr1:144924738-144942083 | Tonsil | SE_63706 | chr1:144940108-144942397 | HSMM |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 144940600 | 144940800 | chr1 | 144940803 | 144942097 | chr1 | 144942305 | 144942636 |
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| Number: 2 | ID | Chromosome | Start | End |
GH01I148941 | chr1 | 144939823 | 144943379 | GH01I120566 | chr1 | 144940158 | 144942556 |
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Enhancer Sequence | CTACCACCTC CACCTATCAA AATCCTATCC ACCCTTCAAG TATTTCCTCC AAGCTGCCTT 60 TCTGAGTACC ACCAAAAGAC ATCTTTCTCT TCTTCCATCT TCCAAAATAC TTTTTTGTAC 120 CTATAGTAAC TTGTATGTCA TTTCTCCATA CTGCGTTCTC CCCATTAGCT GGTAAGCTAC 180 TTAAGAAAAG GAACCACAGC TTTCTCATCT TGGTATCTGC TATGGTTTGA AAGTTTGTAT 240 TCCCCTCCAA ATTCATATGT TGAAATCCTA ACCCCCAACA TAATGGTATT AGGAGGTGGG 300 GGCTTTGGGA GAGATTAGTG TCCTTATAAA AAGAGACCTC AGAGAGTTAG CTAATCCCTT 360 CTACCATGTG AAGACACAGC AGGAAATCCA TAAACCAGAA AGTGGGCCCT CACCAGACAC 420 TGAAAATGCC AGTGCCTTGA TCTTGGACTT CCCAGCCTCC AGAACTGTGA GAAATGAATT 480 TCTATTGTTT ATAAGCCACT CAGTCTATGG TATTCTGTTA TAGCAGCCTG AGTGGACTAA 540 GACTGCTTCT GAAGTATTTG GAACAGTATC TTTCTAGATC TCAATAATCA TTGAATGAAT 600 GAATAAAGAA ATGCCTTTCC TTTTCATATC TACTTGGTAA AATCCTACTC ATTCCTCAGA 660 GACCAAAATC TTTGCTTCTG ACCCCAGTCC ATGATGATTT TTCCTTTCTG TACTGCCTTG 720 TATTTTTTTC ATCAGTGACT TTCTCCTATT GTAATCTCTA GAAGGTAGAG ACTAAATCCT 780 GCACATCTTT GTGTTCTTCT TCCTTCACCT AACAGTACCT TGTGCATTAC AAGTGCTCAG 840 TAAATATTTT TGATTAAGTT GTAAAGCAGC TGCCTATTTT TCCACTTCCT TTGCTGCTCA 900 AAAGGATTAG AGCAATGATT GCTTTAGCTG CTAAGGCCTG CTTCAGAGAC ACATTATTAA 960 TGAAGGTTGT CTGGGAGACA GTAATGTTGA ACGGGGATTT GTAAATGAGT CTCCAGCTTC 1020 AACATTCATC AGCAAAAGAA GGGGATACTG AAAAGCTACT CTAAAAAAAA ATCTCATATG 1080 AAGTTGTCCG GAGCTGCCTG AGCTACTAAT CACTGCAAGG TTTTCAGTCT CTGCCTTGAG 1140 CATTTAGAGC ACATTCTTGC CTTAACCTCC AAGTCAGATC TCTCCATGGT AACGCAGGAA 1200 TGTTTGCTAT TTTAGGAAAT ATGCCTCACT GCATGCAGTA CTATTTACAT TAAGTTCCAA 1260 ACAAGGCATA AATGCAACAG CTTGACTGTG CTAATTTGTG TGAGTGGGAA GGTCTCACTT 1320 ACTTAATGTG GGCCTCTCCC TAATTGTGTT ATCCTGTCTC ATTTTATAAG CCAACCACAG 1380 TGAGATTACA TGTTAATAAA TTTTGCTCAT CTTATACTGA AGGAGAAATG CAGAGAGAGA 1440 AAAAAGGCGA CAAACAAAAC AAGAATTCCT CCAGACCTCC CTTTGCAAGG GCATCATTTT 1500 TTCTGCCTTC ACACCCTCCA GGTCTGGTTT CATTTAAAAC CTTCATTGAG ATGAAGCTTC 1560 TAACATTCTG TAGAAGGAAA TAATATCAAT AACTGAAACA ATTGCTAGCT TTTCCCTGCA 1620 ACTTTGTAGA TACCTTTACT GAGGAAGAGA AAAATGCTTT GTAAACTTTA TTAGATTTTC 1680 TGACTCCCTA GTGAAAAAGA TGTGGACAAG ATGTCACAGC CTCACATCAA AAAGCTCCTC 1740 AACACTCTGA TCACACATAC TATTGATCTG AATGGACATC AAGAAGGATT GGAAGGAGAT 1800 ATGGAATGAT GTCAGTCAAT GGCATATCTA GTTGGTGGTA CTTTTTTTGC TTTACAAGAA 1860 GTTAATTATA GACGTTCATA AATACTGTGC AAGTGCACTC CCACTAAAAT GAATGTTGTA 1920 GAATGTTTTG GTAGAATGGA AAAGGAAAAC AGCTAGAAAG ACTGTAAGAT CAATTAAATA 1980 AAATAATCTT TATCAAAAGT GTCTGTCTTA TTTGAGAGAA TGAAGACTCT GAAGTGAACT 2040 TCCTGTACTC AGATATTACA GTGAGTATAT TATACTCATA CTCCAGACTT TCATACTGGG 2100 ATCACTTGAG AGATAGTTAT CTGTGGGATG TGGAGTAAAT TAGCGTTCTT CACTTGGACA 2160 ATTCAGACCT AGAAGTGCAA GATCTGTGAG CTCTTCTTTC TTCTAGGGCC CAACTGTTTG 2220 TGGTATTCTC AGTTGTGAAG TATAGGTGGA ATTAAAGGAA GTGAATAGGT CTTTAGAACT 2280 TAAGCTCCTC CATACTCCAG CTGAATCAGT GAGGGATTCC AGGGATGGCT TCACTGGAGA 2340 TGAGGAGATT CTTTAGCCTC TGAAGAACAG GCCCAGAGCT TAGAAATTGA ACTTTTACCT 2400 TCCACATTGT AAGGGTCTTT CTTCTGTGGT GACAGTTGGC ATGGCAGACA AGGTTTGAGT 2460 AGAATACAGT GGAACTATAA CTGTTACAGT GAAAGTATAC TGTTAGCAGA GAAGGATAAC 2520 ACCCACAACA TAGGCTCCAA GTGTCACAAA 2550
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