Tag | Content |
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EnhancerAtlas ID | HS117-00424 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:143992360-143993500 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:143992849-143992870 | ATGAGGAAAGTGAAACTCAGA | - | 6.44 | IRF2 | MA0051.1 | chr1:143992853-143992871 | GGAAAGTGAAACTCAGAG | + | 6.24 | Mafb | MA0117.2 | chr1:143992994-143993006 | TGTCAGCATTTT | - | 6.62 | TBX2 | MA0688.1 | chr1:143992636-143992647 | GAGGTGTGAAA | + | 6.14 |
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| Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
SE_03284 | chr1:143992144-143993814 | Brain_Angular_Gyrus | SE_03937 | chr1:143988807-143994041 | Brain_Anterior_Caudate | SE_05248 | chr1:143988738-143994157 | Brain_Cingulate_Gyrus | SE_06288 | chr1:143988677-143994186 | Brain_Hippocampus_Middle | SE_07109 | chr1:143988755-143994121 | Brain_Hippocampus_Middle_150 | SE_08886 | chr1:143992546-143993564 | Brain_Mid_Frontal_Lobe | SE_09271 | chr1:143979006-144016984 | CD14 | SE_36217 | chr1:143989934-143994076 | HMEC | SE_36936 | chr1:143990303-143994482 | HSMMtube |
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| Number: 3 | ID | Chromosome | Start | End |
GH01I145015 | chr1 | 143988901 | 143993897 | GH01I206279 | chr1 | 143989719 | 143993929 | GH01I121261 | chr1 | 143990398 | 143993806 |
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Enhancer Sequence | ATTCTACAGA AGTTCTATCA AAGCAAGTCA TGTAGTGTGT TCAGGGTCCA GAACCTGAGT 60 TCACCAGCTC CAGGCTGATT CACTTTTGTC AGCTGCATCC AACCTAAGCC TGGAACCAGA 120 TTGAATCAAA TGCTAAGTTT TAATGTCTTT CATTTGGTTC TTTTATTTAG TTCAGTGTTT 180 CTTACTGCTA GCTGACTTGG CTCTGAATTT TGTTCCTGCC TCAAGCAAAT TCTGAATATG 240 CCCATCTATG GATTTGAACA GTAGGATGTT TTTTCAGAGG TGTGAAATGA TCAGGCAGCT 300 TGATAACTTT AGACATACTG TACGTTATGA AGCATTTTCT TGCTTCTTGT TGTCTTTTTC 360 TGGTGGATTG AGTCAATGCA GTTGGTAGAA TCTTTTCCAC TTATGTTATT GAGGCATGTG 420 GTTGAAAAGT GGCCTTTAAA TGGTGTGAGG TGGGTAGGCA GGGGATAAAT TCTTACCACA 480 GTTTCTAGGA TGAGGAAAGT GAAACTCAGA GGCCCAAATC TTCTGACTCA CACAGTGATT 540 CTGGGGCTGT CTGTAATATC TAAACGATGA GACTGATCTA CTTGCAAGGT CAGGGCATGT 600 GGTCATTTTC TTGCTAGCCT TTGGATCACC AGGCTGTCAG CATTTTGAGG GGGAGTATTT 660 GCATCTTGCT TTATTTGGAA GATTCAGCTT GAGGGAGTCA TTATTAGAAG ATTCTTAGAA 720 CACTTGAGCC CTCTGAAAAT GAAAAGTCTC ACATTTCCCT TCTACTTTGG CTCTCTGTTG 780 GAGGGGAACA CTTATGTCAT TAAAAACATT GTACTTTGCT TATCTAATTC CCACTCTGTG 840 TTCACATTAA TAGCTTCCCA TTGCTCTTAG GAACAATTCC ATACTTCTTC AGACTATTTG 900 CAATACTCAC CAGAGCTTGA CCCCTGCTTC TTTCAACAGT CTCATCTTTT TTTCCTCTTC 960 TCATTTAAAT TCTATGCTTC AGTTACCCTG AATTTCTTCG ATTATTTCGG TTCCTTGCAT 1020 GCAGCTTCTT TTCTGTTGCC TCTGGGCCTT TGAACATGCT GTTGGCTGGA GTACTTTTCC 1080 TGCCTTCTTC CCATAGGTAA TTCCAATCCT TTACGTCTAG CTCCTCTGCG AGCCTCTTGC 1140
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