EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS117-00418 
Organism
Homo sapiens 
Tissue/cell
LHCN-M2 
Coordinate
chr1:120556960-120559420 
Target genes
Number: 4             
NameEnsembl ID
TF binding sites/motifs
Number: 3             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
MAFKMA0496.2chr1:120558607-120558626TATAGCTTACTCAGCAAGA+6.04
MAFKMA0496.2chr1:120558607-120558626TATAGCTTACTCAGCAAGA-6.31
Myod1MA0499.1chr1:120557817-120557830TGCAGCTGCTCCT+6.15
Number of super-enhancer constituents: 27             
IDCoordinateTissue/cell
SE_00001chr1:120545720-120570355Adipose_Nuclei
SE_00811chr1:120556988-120557599Adipose_Tissue
SE_00811chr1:120557727-120558457Adipose_Tissue
SE_00811chr1:120558802-120559057Adipose_Tissue
SE_03065chr1:120555710-120557739Bladder
SE_03065chr1:120557761-120559627Bladder
SE_03434chr1:120554599-120564678Brain_Angular_Gyrus
SE_03980chr1:120549079-120570221Brain_Anterior_Caudate
SE_07385chr1:120548934-120569847Brain_Hippocampus_Middle_150
SE_08816chr1:120556940-120559534Brain_Mid_Frontal_Lobe
SE_09137chr1:120545789-120570232CD14
SE_12867chr1:120554695-120560603CD34_Primary_RO01480
SE_13322chr1:120545914-120570095CD34_Primary_RO01536
SE_14057chr1:120546042-120569730CD34_Primary_RO01549
SE_18945chr1:120550673-120570213CD4p_CD25-_Il17-_PMAstim_Th
SE_26595chr1:120555685-120560732Esophagus
SE_29608chr1:120554644-120561087Fetal_Muscle
SE_36951chr1:120555708-120560186HSMMtube
SE_41312chr1:120555136-120563468Left_Ventricle
SE_42341chr1:120556611-120563456Lung
SE_43397chr1:120554561-120565886MCF-7
SE_45586chr1:120545832-120570231Osteoblasts
SE_46953chr1:120556751-120557698Ovary
SE_46953chr1:120557769-120558574Ovary
SE_46953chr1:120558653-120559658Ovary
SE_49875chr1:120554642-120565868RPMI-8402
SE_53396chr1:120556680-120563463Spleen
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1120557200120557502
Number: 1             
IDChromosomeStartEnd
GH01I120014chr1120556661120559639
Enhancer Sequence
GCAGATTGCT AGAGCAGAAG TTCGAGACCT GCCTAGACAA CACGGGCAAC ATGGTGAGAA 60
CCCCATCTCA AAAAAAAAAA AGTGTCATTT CTGACATTGA GAGGTCCACA TTTCCATTGT 120
TACTGTTCAA ACATACGCAT GGGGTTGGAT GTAGAAAAGC AAAGGAAGGA AGAAAACAGA 180
GAAAAACAAG GGATTCCTCC TAATGGAACT AGAAAACATT CCATTTGAAG GATACCCCTA 240
CAGTTTCCTC TCACTTAAGC AGATGAAAAC CAGACCCCAA CCCTCACATC TCACTAGCAG 300
CCTGGATTAG TTTACATGTA GCCACTTTAC AGATTTCAAC GAAGCTGGGA TCTGAATAGC 360
AATTCCAATC TATCTGGCAA TGGCTGCAGT TCAGGATCAG TCTCCCTAGT AATACAGGAC 420
AGAAAAATTT GTTCTTTCAC GTTTCCTAAG TGAATAGCCA CTCGTCTACA GAAAAGCTTA 480
AAACAGTGTA GCAGCTTGTG TCAGCTCCAA GATGACTGAA GTCTGAGCAG GAAATAAGCC 540
CCTTTTCCAA ATAAAAGCCA GTGTTCTCTC CCCTTGTTTT CTCCACCGAA TGTTCTGTAT 600
CAGCAGGGTG AGGCCAAATT GCATCCAGGG CTTTGCTGCA GCTCTGTCTT TAGCTTTTTT 660
TTTTTTTTTT TTAAAAACGA GGATTTGGCC ATTCAAAAAA AAACAACAAC AACAACAAAG 720
CAAAATCCCA CCACATACAA GAAGAAAAAG AGAGGCATGC TTTACAAAAC AGCTATTTCA 780
AAATCATGAT TTTTAAAAAA ACTATACAGA ATGTGGAACG AAGGGGAAAA AAAGTCTCAT 840
GTGGGTTGCG TCGGCACTGC AGCTGCTCCT CATTAAAGCT CCTCTTTACT CCCTCTGGGC 900
TAGTTTCCAG CAGAAAATTC TTTGAACAGA ACTCTGCTTT CAACCCACTT TCTTCTTGCG 960
CTGGGCCTCT TGGCCCCCCA ATCCGCAGTG GCAGCCTGCC CTAGCTGAGC TCTAGAGGGG 1020
GGAGCTGTCG TTAAGGTAAA TGAGGTAAGG GCAGGGGAAA AAACTAACAA AACCCAGAAA 1080
CCAAATTAAG CATCGGTCAG TAACAAAGGT CTGCAGTTTG AAAGGCTCCA AATCAGTCTG 1140
TTCTTTCCTG TGACCATAAT GCCAGCTTAG TTTCCTGCCC CCCTACTCTG TCCCCCCTGT 1200
TAAAGTAGAT AAAAATAATT GCTAACAGCC AAGGCTAGCT GGAACCAGTG AAAGTTCCTA 1260
TGTAACATTC AATTCCCAAG GCTCCGACTA CAAACTTGTA GGTACCCCAG AGCCTATAGA 1320
ATCAAGTCTA AACTTCTAGG CTGGCATTCA GGAGGCCTAA CCCACCTATT GGTCTAAACT 1380
CACTGGTCTC CCTCCTTTCA GTACCTCCTG GCTGAGGTCT GATGGGCTTG TCAACTTTTT 1440
AATTCTGTCA CTCTGTGTAA AGGTAACTAA CTAGGTTATG CTAATTACCA ACTTTGTTTT 1500
AAAAACATGC ATGAGGACTT CTAGTTAACT TCCTGGTAAA GAGGGGAAAA AAAGAGAAGA 1560
AGCTCTGTCA TACTACTTCT TGCCATTCCC ACTCTACTCT CAACCCCCCC TTCTCTCAAA 1620
AAAAAAAGAA AGAAAAAAAG GAAATACTAT AGCTTACTCA GCAAGAAGGA AAAACAAAAA 1680
GAACTTTAAA AAAAAGTATT TGTGTATAGA TTGGTGTCCA GAACTGGGAC GCTTGTGGTA 1740
AAACACACTT TCTAGTGTAG TTTTTCTAGG GCCTTACTAG TTGTATGTGA AGGAAACAAA 1800
GACAAGTATA CAATCTCTCA CTCTCACACA CGTACACACA CACATACACA CTTTTATCAC 1860
AACTAATACA CAAAGACTAC CAAATACTGC AGGGCAGCTC ATTTTTCTAC TATGTAAATT 1920
CAGCTTCCTG GACAGACCAT TTCTGCTTTT CTTGTAGAAG TATTTCAGAA AATGTTAATC 1980
TTGGTTCCCA CATTAGGTTG CATGCTTCCA AATTAAAAGT TTCCCACAGG AAAAGAACTT 2040
CACGAGGAAT TGTGAGGCTG GGAATTATCT CTGAAACCCC ACCTCACTTA GTTTACATGT 2100
GTTAGGTTTT TCACCCCCTC ATCTGAATAA AGCATTAAAT ACACACTGAT TTTAAGAAAC 2160
CTAAACCAAA AAGAAGCTGA AGTGATACGG ACTTTAAAGC TGTTGATTCA CAGCATCATT 2220
CATCTTCACT CAGACTATGA AATCAGTAAC CACTGCAATG AGAAACCATG CTTTATTTAT 2280
ACAAGAACTT TACAAACATC CTTATCTTCC AGTTTACAGT CTGGGCTCAT TTATCAGAAC 2340
TCAAAGGCTG AGCTGAGCAC CTAGTCTCTT CAATCATCAC TTGAAAGATT GGGAAGGGGC 2400
ACACAGTGTT AAAAGACTTG TGTTGTTGCT ATAACAGAAG GTGGTCTTTC CTCTGTGTTC 2460