| Tag | Content |
|---|
EnhancerAtlas ID | HS117-00193 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:42104380-42104990 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:42104807-42104828 | TTCTATTTTCAGTTTTATTTG | + | 6.1 | | MSC | MA0665.1 | chr1:42104566-42104576 | AACAGCTGTT | + | 6.02 | | MSC | MA0665.1 | chr1:42104566-42104576 | AACAGCTGTT | - | 6.02 | | MYF6 | MA0667.1 | chr1:42104566-42104576 | AACAGCTGTT | + | 6.02 | | MYF6 | MA0667.1 | chr1:42104566-42104576 | AACAGCTGTT | - | 6.02 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_25389 | chr1:42104475-42105429 | DND41 | | SE_37004 | chr1:42103824-42109660 | HSMMtube | | SE_52150 | chr1:42104415-42105794 | Skeletal_Muscle_Myoblast | | SE_58724 | chr1:42087777-42140608 | Ly1 | | SE_61251 | chr1:42088347-42140325 | HBL1 | | SE_63968 | chr1:42104366-42105924 | HSMM |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I041638 | chr1 | 42104254 | 42106518 |
|
Enhancer Sequence | ACCCAAAATC ATGAGGAGGG AGGGCCCTTG CTCTCCACTC TCCACCAACA CATCAAAGCA 60
AGGCCTTTGC CAGCAGCTGG TAGGGGCCGC ATCCGGTCTG GGCACTGGGG GTTGGCATCA 120
CTGCAGCTGA CAAAGGGTTA AAGAAAAATC CTGGATGCCT GGCAGGGGCC AGCCTCACTG 180
GGTCATAACA GCTGTTTTCC AAGGGCTGGC AGGGAGGCAG GGGGGCTTTG GACTCTGGCA 240
CTGGGCCTCA CACACTGATC CTAAAGAAAG TGGAGAAGAA GGCTGGCCCT GAGGCCCCTG 300
CCACCCTCCT GACACCCTCC TGACACGTGG CCCTTCCCTC CACTCTGAAC GGAACGTCTG 360
CAGAAGGGGC CGGCACATGG AAAGTCAAAT TTGATCTGTG TGGGGCAGGG AATTGTGGGA 420
TGAATCTTTC TATTTTCAGT TTTATTTGTT ATTGTGGTCT GTGATCAATA AGAAAACATG 480
AAAATCTAAG ACATGGGTCA CACATGGCAG AATCATATGG AATAATCCTG GTGGTTCATG 540
CTGGGATACT GGCAAAGGGG TGGATGGGAG GGGAAGAGAG AGAATTACTG GCATGCCTCA 600
TTTACCCAGC 610
|
