| Tag | Content |
|---|
EnhancerAtlas ID | HS117-00184 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:39859940-39861990 |
Target genes | | Number: 13 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr1:39860602-39860619 | TGACCCTTCCTTGGCCT | - | 6.18 | | RREB1 | MA0073.1 | chr1:39860733-39860753 | TTTTTGGGGGTGGGTGGGGA | - | 6 | | ZNF263 | MA0528.1 | chr1:39860738-39860759 | GGGGGTGGGTGGGGAGGAAAG | + | 6.09 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_00753 | chr1:39855343-39861646 | Adipose_Nuclei | | SE_02098 | chr1:39860180-39862099 | Aorta | | SE_02863 | chr1:39860041-39862159 | Astrocytes | | SE_26157 | chr1:39855144-39866292 | Duodenum_Smooth_Muscle | | SE_30690 | chr1:39860149-39865801 | Fetal_Muscle | | SE_37092 | chr1:39855581-39868937 | HSMMtube | | SE_38617 | chr1:39856603-39862237 | HUVEC | | SE_46332 | chr1:39860146-39866167 | Osteoblasts | | SE_47389 | chr1:39856575-39867060 | Panc1 | | SE_49419 | chr1:39860157-39861822 | Right_Atrium | | SE_55086 | chr1:39859150-39865239 | Stomach_Smooth_Muscle | | SE_55918 | chr1:39856681-39866226 | u87 | | SE_64104 | chr1:39860136-39863063 | HSMM | | SE_67929 | chr1:39856681-39866226 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I039391 | chr1 | 39856812 | 39867008 |
|
Enhancer Sequence | TGATTGATTT ATTGCCACAT AGAAAGCAAG CTTAGGCATC TTCATGTGCA CATGAGAAAA 60
GCCCTGGAAG AGGCTGGGGG CGGTGGCTCA CGCCTGTAAT CCCAGTACTT TGGAAGGCTG 120
AGGTGGGTGG ATCACCTGAG GTCAGGAGTT CGAGACGAGC CTGGCCAAGA TGGTGAAACC 180
CTGTATCTAC TAAAAATACA AAAATTAGCT GGGCATGGTG GCACATGCCT GTAGTCTCAG 240
CTGTTTGGGG AGGCTGAGGC AGGAGAATGG CTTGGACCTG GGAGGCAGAA GTTGCAGTGA 300
GCCGAGATCG CACCACTGCA CTCCAGCCTG GGTGTCAGAA AGAGACTCCG TCTCCAAAAA 360
AAGAAAAAGA AAAGCCCTGG AAGACAGGGC CCAGCATGGA GTTGAAAGAC TGCCAGTTTA 420
CTCCTTCCTT TCAAATGATT ACAAGGACAG TATCAGCTCA TGTACGTTTT TGGCAGTTAG 480
TACACCTGCC TGAGAGTGAG TCACTGGAGG ATAGAGCAAA TGAGGTTAGC GTTATCTACC 540
TGCCCTTGGA GAGACAGGAA ATCACACTTG GTATGACCTG TCTGTCACCT GGAGGTTTAG 600
GTTTCCCCAG CTTTACCAAG ATGAGTGGGT ATCCTCTATC CCTGCCAACC CCCACCTTGT 660
GCTGACCCTT CCTTGGCCTG TCTTGGTTTT TTCCTTTCTT CCTTAAACAA AGCTACTCCA 720
AATAGGAACT AGGGTCCAAG GAAATAAAGA CAGTATCCTA AAATGGATTT CTCAATTTCG 780
GCACTATTGA CATTTTTTGG GGGTGGGTGG GGAGGAAAGG GGCAGCCACT CACGCCACCA 840
CCTCTGCCTG CCACTATCAA CATTTTGGAC TGGATAATTC TTTGTTGTGA GAAGCTGTCC 900
TGTGCATTGT AGGCTGTTTA GCAGCATTTC TGACCTAGTA ACTTCCCAGT TGTACAACTA 960
AAAATGTCTC CCTGGAAGGC AGAATTACCC TCTGTTGAGA ACTATAGCCC TGGAAGAAAT 1020
TGCCACCTAT ACATGGGAAA CTTAGAATTC AGGTGGAATA GGTTACTAGT TAAATATTTA 1080
TGTAACAAGC AGCCTTCTGA TAATCTGATT ATGACTGTGT GTAGTGGCAA CAACCACTTC 1140
TAAGTCAGCT TTCCTTTAAG CCAGGCTCTG GATTCTTTAT TTTTGCTGGC CTTAATCTGT 1200
GTCTGGCTTA ACACCTCCTG GTCACTTTCC CTGGCTGGAA TTTACGTACA GTTGTCAGTT 1260
GTTGATGCAG GTGTTTGGTT GATGATGCAT TGCCAAAGAG AAGAGGAACT TCCTTTGTGG 1320
ACATACTTCA GGGAGCTTCC TTGTTCTGTG CCTTTAAGGG GAGACTACAG TCTCTCAGTT 1380
GTTCTCCACA GCCAACCAAG AGTTTGGCTG CTGATATTTA TAACCCTTAT GTGACCACCC 1440
CCACCTCCCC ACCCCACAAA GAATTCCAAT GCTCTGTAAT AATCCTCTCC ACCCCCACCA 1500
TAGCAACTGG ATGTGGAGAA GGTGAAGGAG CCTTTAAGGC CTTTAAGTTT GCTTCATGTT 1560
GAACCTTTTC CAGCTCCCTT TTAAAATATT GCCAGTTGTA TTTTAAATAT CAGTGTCACA 1620
AGCAAAATCC CAGGCTTGCA GCCACTGCAT CATCTTAAAG GAGCCTCATG CCCCAGTGAA 1680
GGTAGTAAAA TTGAATGGAA GGTAGTAAAA TCATCAAGAA AGGATTGATA GATTTTACAA 1740
AAATCTGTCT GGAAATTTGA TAGCAAGGTG AGATTTTAAA GCAACAAACA GGCTAGGCGC 1800
AGTGGCTCAT GCCTGTAATC CCAGCATTTT GGGAGGCTGA GGCAGGTGGA TCACGCTGTC 1860
AGGAGATCGA GACCATTCTG GCCAACATGG TGAAACCCCA TCTTAGCCGG GCATGGTGGC 1920
ATGCGCCTGT AGTCCCAGCT ACACAGGAGG CTGAGGCAGG AGAATCGCTT GAACCCAGGA 1980
GGTGGAGGTT GCAGTGAGCC GACATCGCGC CACTGCACTC CAACCTGGGT GACAGAGCGA 2040
GACTCCATCT 2050
|
