Tag | Content |
---|
EnhancerAtlas ID | HS117-00178 |
Organism | Homo sapiens |
Tissue/cell | LHCN-M2 |
Coordinate | chr1:39623820-39624890 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CREB1 | MA0018.3 | chr1:39624486-39624498 | GGTGACGTCACT | + | 6.22 | CREB1 | MA0018.3 | chr1:39624486-39624498 | GGTGACGTCACT | - | 6.22 | Foxq1 | MA0040.1 | chr1:39624109-39624120 | TATTGTTTATT | + | 6.62 | Hnf4a | MA0114.3 | chr1:39624505-39624521 | GTGGTCAAAGTCCAGT | + | 6.51 |
|
| Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
SE_02052 | chr1:39623700-39625273 | Aorta | SE_06399 | chr1:39623194-39625443 | Brain_Hippocampus_Middle | SE_08441 | chr1:39623554-39625364 | Brain_Inferior_Temporal_Lobe | SE_14598 | chr1:39623413-39625353 | CD4_Memory_Primary_7pool | SE_25799 | chr1:39623252-39625649 | Duodenum_Smooth_Muscle | SE_30410 | chr1:39623509-39626362 | Fetal_Muscle | SE_32006 | chr1:39623632-39626196 | Gastric | SE_35822 | chr1:39623459-39627010 | HMEC | SE_36947 | chr1:39622990-39632657 | HSMMtube | SE_37973 | chr1:39623508-39626483 | HUVEC | SE_42256 | chr1:39623665-39625283 | Lung | SE_45768 | chr1:39623568-39627263 | Osteoblasts | SE_47164 | chr1:39622875-39627546 | Panc1 | SE_51765 | chr1:39623560-39625373 | Skeletal_Muscle_Myoblast | SE_53123 | chr1:39623552-39625824 | Small_Intestine | SE_54583 | chr1:39623552-39625585 | Stomach_Smooth_Muscle | SE_63563 | chr1:39623442-39625404 | HSMM | SE_64261 | chr1:39623623-39625416 | NHEK |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I039157 | chr1 | 39622978 | 39627255 |
|
Enhancer Sequence | TTTGCAGTAG TGACTGACAC ATTAAAGCAA CCCCGAAACA AATCAGAGTG AAATAGTGTC 60 CTGGAGTTGG GGATATGTGG GTGATATCTG GGCTGCATTT TCTCTCTAGG TATCCATGGA 120 GAGGGTCCTG TCTCCCTGAA TGGTTGTGCT TTCAACAGTT AGGGAATGAG CTTGACAGTT 180 TCTGCTTCTT CCCTCCCCTT GCCTTGAACT GCCTTGATAT GCAGTGCCTC CTCTGTTGTG 240 TGGCTGTATT CCAGTCCGTA AACATGACTG CTGTAAGGAG AGTACAGAGT ATTGTTTATT 300 TTGTAAAACT TGTCTCATTG CCATGTAATA TTTGCTCAAG AGCTCCTGTT GTGGTGATAT 360 TCTTGTGGTG AGCATGGCCC TTTAAAGATT TTGTTCTCAA ATGTTAAATG AGCCCCTGAC 420 TGGTGTCCTG AAAAGCATTT AAGCTTCTCT CCCTAGAGTT TAAGCAAGAG GAGCAGTAAT 480 CCCAGTGGAG CCTGGGCTGG GGTCTAGAGA GAAGGTGGCA GATGAGGTGG CAGATGACAG 540 GCAGGGGCGG TTGTGGTCCC GTAGCTCATT TGCACAAAGG AGGGGCTGGC CTCTCCTGGG 600 GAGGTATTTC CGCTCACTGG AACAAATGAG GGCGCTCAAA AGGCTGTAAT GTAATGAGGC 660 TTCTCTGGTG ACGTCACTTG TAAATGTGGT CAAAGTCCAG TTCTTGGGGG CTAGTAGAAG 720 CGGGAGTAGA GATCATTCGG TTTGCATGCT TTCACTTCTC AGCTGTCACT GTGCCATGGT 780 GCCTACTTTC AGCCAGTGAA CCAACTCAAC TGGGCCGGGC ATGAACGCTT ACAAGTATCA 840 GAAGTTCCTG GAGGGACTCA ACAACCTTAG AGGTATTACA AGGCTTCAGG CTCCCTACCC 900 TTTGTCCTTG CTGATCGTGT GAGCACTTAT TATGGTGTGT ATTGTATAGG GTCTGTAAAA 960 CCCTCCTGCT CTGAGCTGGC CCTATTTTTT ATGCGTTTAG GCAATTAAAC AGAAGGGATA 1020 GAGTTTGTAA ATGCAATCCT AAGTGAGTAG GAGAGAATCT CCTTAGGTAC 1070
|