EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS116-00452

Organism

Homo sapiens

Tissue/cell

Left_ventricle

Coordinate

chr1:17240040-17240420

dbSUPER

Number of super-enhancer constituents: 48
ID	Coordinate	Tissue/cell

SE_01476	chr1:17239966-17242069	Adrenal_Gland
SE_03430	chr1:17239783-17240499	Brain_Angular_Gyrus
SE_04111	chr1:17237927-17240527	Brain_Anterior_Caudate
SE_05172	chr1:17237770-17246094	Brain_Cingulate_Gyrus
SE_06210	chr1:17237645-17245771	Brain_Hippocampus_Middle
SE_07232	chr1:17238080-17242647	Brain_Hippocampus_Middle_150
SE_08076	chr1:17237896-17246252	Brain_Inferior_Temporal_Lobe
SE_08889	chr1:17239947-17240454	Brain_Mid_Frontal_Lobe
SE_10448	chr1:17239853-17240476	CD19_Primary
SE_11024	chr1:17237883-17245307	CD20
SE_14531	chr1:17239563-17241985	CD4_Memory_Primary_7pool
SE_15440	chr1:17239829-17241939	CD4_Memory_Primary_8pool
SE_16401	chr1:17239578-17241745	CD4_Naive_Primary_8pool
SE_17223	chr1:17239936-17240632	CD4p_CD225int_CD127p_Tmem
SE_17702	chr1:17238954-17242280	CD4p_CD25-_CD45RAp_Naive
SE_18224	chr1:17239283-17242338	CD4p_CD25-_CD45ROp_Memory
SE_19865	chr1:17239824-17242024	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20182	chr1:17239788-17241910	CD56
SE_20877	chr1:17239477-17241855	CD8_Memory_7pool
SE_21501	chr1:17239632-17241900	CD8_Naive_7pool
SE_22012	chr1:17239593-17241877	CD8_Naive_8pool
SE_22656	chr1:17239909-17240454	CD8_primiary
SE_23911	chr1:17239885-17240478	Colon_Crypt_2
SE_25305	chr1:17239947-17241454	Colon_Crypt_3
SE_27153	chr1:17239835-17242028	Esophagus
SE_28353	chr1:17239867-17240494	Fetal_Intestine
SE_29508	chr1:17239703-17240542	Fetal_Intestine_Large
SE_29649	chr1:17238840-17240515	Fetal_Muscle
SE_31118	chr1:17238627-17240491	Fetal_Thymus
SE_31881	chr1:17239819-17242135	Gastric
SE_33013	chr1:17239950-17240437	H1
SE_33540	chr1:17239257-17245174	H2171
SE_35172	chr1:17239807-17241711	HeLa
SE_42843	chr1:17239864-17243201	Lung
SE_45444	chr1:17239949-17240367	NHLF
SE_47744	chr1:17239961-17240545	Pancreas
SE_51608	chr1:17238813-17242145	Skeletal_Muscle
SE_53155	chr1:17238762-17240528	Small_Intestine
SE_53544	chr1:17238838-17241941	Spleen
SE_54964	chr1:17238808-17242458	Stomach_Smooth_Muscle
SE_55554	chr1:17240073-17240473	Thymus
SE_61917	chr1:17221528-17256732	Toledo
SE_63124	chr1:17215209-17241689	Tonsil
SE_63250	chr1:17222916-17254487	GLC16
SE_63321	chr1:17222804-17249569	NCI-H82
SE_65449	chr1:17237943-17242529	Pancreatic_islets
SE_67642	chr1:17239816-17240437	u87
SE_68996	chr1:17239943-17241712	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I016912

chr1

17238896

17241927

Enhancer Sequence

AGACAGGCGC GCCACCGGGT TGAGTCTCGC GAACAAACTG AGGCCAGAGT GCCTTCCCCA 60
GGGCTGCACG TCAGTCAGGA AAAAAAAAAG CATTCTCTCC GACAGGTCAA ATCACCGAAG 120
CCTCGGGATC GTCGCTGGGG GCTGTGACGG GGCTGGCATG AAACGTCCCT CTGTCTGGCT 180
GGGCGATGGG TCAGTGCTCA GGAGTTTCAG GCCTTTAAGG CCCGGCCAGA CCGCAGGGGG 240
ACTCTGCAGC CGGGTCGGGG TTTCGATCCT GCGCTGCGGC CTTGCAACTG CGAGGACTTG 300
GGGGTCGTGC TTCGTTCGCC TGGTATCCTC GTTCGTGCGT GTAGGAGGCG CCTGGCTTGC 360
CGGGCGGTGC CAGGCGGCAA 380