Tag | Content |
---|
EnhancerAtlas ID | HS115-02203 |
Organism | Homo sapiens |
Tissue/cell | Kidney_cortex |
Coordinate | chr19:33531360-33534640 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXP2 | MA0593.1 | chr19:33532688-33532699 | TTTGTTTACTT | - | 6.62 | Foxd3 | MA0041.1 | chr19:33531867-33531879 | AAACAAACAAAC | - | 6.32 | HES2 | MA0616.2 | chr19:33532960-33532970 | GGCACGTGCC | + | 6.02 | HES2 | MA0616.2 | chr19:33532960-33532970 | GGCACGTGCC | - | 6.02 | NKX2-3 | MA0672.1 | chr19:33533006-33533016 | ACCACTTGAA | + | 6.02 | RREB1 | MA0073.1 | chr19:33532089-33532109 | CCTCCAAACATCCCCCACCC | + | 6.14 | ZEB1 | MA0103.3 | chr19:33533183-33533194 | CCCACCTGCCC | + | 6.14 |
|
| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_23354 | chr19:33531310-33533037 | Colon_Crypt_1 | SE_23354 | chr19:33533041-33533729 | Colon_Crypt_1 | SE_23354 | chr19:33533969-33534304 | Colon_Crypt_1 | SE_24632 | chr19:33531833-33532986 | Colon_Crypt_2 | SE_24632 | chr19:33533052-33533609 | Colon_Crypt_2 | SE_24867 | chr19:33531356-33533794 | Colon_Crypt_3 | SE_27867 | chr19:33529698-33533862 | Fetal_Intestine | SE_27867 | chr19:33534149-33535156 | Fetal_Intestine | SE_28788 | chr19:33529691-33534092 | Fetal_Intestine_Large | SE_28788 | chr19:33534145-33535514 | Fetal_Intestine_Large | SE_32296 | chr19:33531754-33533737 | Gastric | SE_33901 | chr19:33530645-33533837 | HCC1954 | SE_33901 | chr19:33533925-33535494 | HCC1954 | SE_35571 | chr19:33529621-33533888 | HepG2 | SE_42005 | chr19:33532234-33532844 | LNCaP | SE_42005 | chr19:33533043-33533521 | LNCaP | SE_47226 | chr19:33529418-33544806 | Panc1 | SE_50977 | chr19:33531317-33533825 | Sigmoid_Colon | SE_52660 | chr19:33530653-33533813 | Small_Intestine | SE_52660 | chr19:33533949-33535437 | Small_Intestine | SE_56754 | chr19:33531354-33532337 | VACO_400 | SE_56754 | chr19:33532345-33533023 | VACO_400 | SE_56754 | chr19:33533064-33533657 | VACO_400 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr19 | 33532238 | 33532582 | chr19 | 33531845 | 33532952 | chr19 | 33534044 | 33534233 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I033039 | chr19 | 33529636 | 33535923 |
|
Enhancer Sequence | GTCTCGATCT CTTGACCTTG TGATTCGCCC ACCTCGGCCT CCCAAAATGC TGGAATTACA 60 GAAGTGAGCC ACAGTGCTCA CCGGCCCTGC TTTAAATTTC ACAAGGACTG CCTCAATTTC 120 AGATAAACTT CATCATATTT CTACCCTAGC TTTTCTCAAG GGAGGGAAGC TGGGAGAAGA 180 CAGAATATTG TCTCTGGTTG GCCTAAATGA AAAAGTACGG TCAGGCATGG TGGCTTACAC 240 CTGTAATTCC AGCACTTTGG GAGGCTGAGG CAGGCAGATC ACCTGAGGTC AGGAGTTCCA 300 GACCAGCCTG GCCAACACCG TGAAACCCTG TCTTACTAAA AGTATAAAAT TTAGCCAGGC 360 ATGGTGGCAC ATGCCTATAA TCCCAGCTAC TCGGGAGGCT GAGGCACAAG AATCACTTGA 420 ATCCAGGAGG TGGAGGTTGC GCAGGTGAGC TGGTATCTCG ACACTGCACT CCATCCTGGG 480 AGACAGAATG AGACTCTGTC TCAAAAAAAA CAAACAAACC TGAAAAAAGT GCATTTGAAA 540 TATTTGATGG CTTCCTAAAA AAACTCCAGG AAGCTCATGG ACTCCCAGCT GGAATGGATC 600 AGAGAAGGGG AAGACTTTGA AGGATCATAA AATCTGGTTT TTCAAGTGCC TGCCTAGCCA 660 CGATACCCTC TGACAGTCCT CAGATAAGGG CTTAGCACCC CCATTTCCAT TCCTGCATTT 720 CTGGGGACAC CTCCAAACAT CCCCCACCCC TATTCCAACA GATCTACTTT CCTTTGGGGG 780 CTGCGGTAGG AAACCTGGGA ACCAGAAGAC AAACAGAAGG AAAGCAGGGC CTAATTTACA 840 ACTGAAACCA CCCATGGCCT GCAGAGACAG CCACGTAATG GGTCGCCCAG GGACACTGAG 900 GGGCCAGAGC GGAGCTTGGC AAAATGCCCT ATTTGTTTTC GGGAAACCGT TGGTGCTTGT 960 TGAGTCAGAT TAATAAATAC CTTCAGGGTT TCCTCTGACA ACATTCTCCA GCAAGGGGTA 1020 CTTTGAACCT TTAGGCCACT GTGAGAATCA TTAACAACCC CCCACTCCTG CCCCTGCCAA 1080 CCCAACCACT GCCAGTTTAA CAATGAGCTT GAGTCAGGCT CGGGCCTCAG AAAGGGTGAC 1140 TGCTGTTGTC GTTAAGAGAA CAAGGCACAC AAAACTGCCC TAGTTCCTGC CTGAGAAAGT 1200 CCAAGTTCCC TGCTCACAGG GGCCTCTCTG ACCACCCTCT GTCTCTAAGG CTGGCCATCC 1260 TGGGCCAACC TCTATGATAT TCAGAGTTCA TTATTCCCTA GAAAACATCA CTTCCCTAGG 1320 TGATCTGATT TGTTTACTTG TCTATAAAAG TCTCCTCCCA TCCTCCAACA AGAGAAATCA 1380 CAAAAGCAGA GCCTCGCCTG ATCTTCAGGC ACCTCAACTG TGCCTGCCAC TTAACAGGTG 1440 CTCAATAGCC AGGCACAGGG GCTCACTCCT GAAATCCCAG CACTCTGGGA GGCTGAGGCA 1500 GGAGGATCAC TTGAGGCCAA GACTTTGAGA CAAGCCTGTG CAACACGGTG AAACCCTGTC 1560 TCTACTAAAA CTTTAAAAAA TTCAATTAGC CAGGTGTGCT GGCACGTGCC TGTAGTCCCA 1620 GCTATTTGGG AGGCTGAGGC AGGAGAACCA CTTGAACATG GGAGGCAGAG GTTGCAGTGA 1680 GCCAAGATTG AGCCATTGCA TTCCAGCCTG GGCAACAAGA GTGAAACTCC ATCTCAAAAA 1740 AAAAAAAAAG GTGCTCAATG AATCCATGAA TAGGTAAATC AATTGTTGTC CACTCCTAGG 1800 AAAGCCATAC ACCATCAAGG CTGCCCACCT GCCCCCTTGG CCACAGAGCA GGCCTGTCCA 1860 AGGGTCAACC AGAACCCTAG GCCACAAAAC ATACCACGGC CTTCCCAGCA CATGACAGGG 1920 AGTCCCAAAA TCGGGGGCCT CTCTCACGTC ACACAGATGA CATGAGTTGC TCTCTGCTAT 1980 GGGAGTGGAC AATTCCCATG TCCAAACTTG TCTTGGGATA GGGACACTGC TTGACTTTTT 2040 AAAAGCCAAA ACGCTACAGT ATTTTTCCCA GCCTCCTCCA GTAACAACCT GCTTTGCACC 2100 CAGTTGCAAA AGGAGCTGGA GAAGAGATTC CCAGACAAAC TTCCCACCCA GGACCTCAAG 2160 TCATCAGGTA TTCCGTGAGT AACAAAAGCA ACACAGGCCA GGCACAGTGG CTCATGTTTG 2220 TAATCCCAGC ACTCTGGGAG ACCAAGGCAG GAGGATCACT TGAGGACAAC AGTTCGAGAA 2280 CAACCTGGGC AACACAGCAA GACCCTGTCT CTACAAATAA TTTTTAAAAA ATCAGTCGGG 2340 CATTGGCCAG GCACAGTGGC TCACGCCTGT AATCCCAGCA CTTTGGGAGG CTGAGGCGGG 2400 TGGATCACGA GGTCAGGAGT TCGAGACCAG CCTGGCCAAG TTGGTGAAAC CTCGTCTCTA 2460 CTAAAAATAC AAAAATGAGC CGGGCACGGT GGCGGGCACC TGTAATCCCA GCTACTGAGG 2520 AGGCTGAGGC AGGAGAATCA CTTGAACCTG GGAAGCAGAA GTTGCAGTGA GCCAAGATCA 2580 CGCCACTGCA CTCTAGCCTG GGTGACAGAG CAAGACTCCG TCTCAAAAAA AAAAAAAATT 2640 AGTCGGGCAT GGTGGTGCAT GCCTGTGGTC CCAGCTACTC AGTAGGCTGT TAGGAGGATT 2700 GCTTGAAGAG CCCAGGAGGT TGGGGGCTAC AGTGAGCTGT GATTGCACAT TGCACTCCAG 2760 CCTGGGCAAC AAGAGCGAAA CTCCATCTGA AAAAAAAGAA AAAAGGTGGC ATGACGCCAG 2820 ACGCAGTAGC TCGCGCCTGT AATTCCAGCA CTTTGCGAGG TGGAGGCAGA CGGATCACTT 2880 GAGGCCAGGC GTTCAAGACC AGGCTGGCCA ACATGGTGAA ACCCCGTCTC TACTAAAAAG 2940 ACAAAAAATT AGCCAAGCAT GGTGGTGCAT GCCTGTGGTC CCAGCTACTG GGGAGGCTGA 3000 GGCAGGAGAA TCACTTGAAC CCAGGAGACA CAGGTTGCAG TGAGCCGAGA TCACGCCACT 3060 GCACTCTAGC CTGGGCGACA GAGCAAGACT GTCTCCAAAC AAACAAAAAA CAAGGCGGCA 3120 CGGGGCTAAC CATGGTCTCC AGTAGAACTC TGAAGGAAGA AGAAACTCTG CACTCTTTGT 3180 AAACAGAGTG CTGGCACATT GTCTTTTGTT GCATTTCGTT GCCTGGAGAG GGTTTATAGA 3240 GGTCTAGACA CAGGTAAGGC TTCTCTGAGT TCTATGCTGG 3280
|