Tag | Content |
---|
EnhancerAtlas ID | HS115-00992 |
Organism | Homo sapiens |
Tissue/cell | Kidney_cortex |
Coordinate | chr12:53296770-53298440 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr12:53297631-53297651 | CCCCACCCCAGCCCACCCCA | + | 6.18 | RREB1 | MA0073.1 | chr12:53297641-53297661 | GCCCACCCCACCCCACCCCA | + | 6.1 | RREB1 | MA0073.1 | chr12:53297645-53297665 | ACCCCACCCCACCCCACCCC | + | 6.22 | RREB1 | MA0073.1 | chr12:53297650-53297670 | ACCCCACCCCACCCCACCCA | + | 6.22 | RREB1 | MA0073.1 | chr12:53297651-53297671 | CCCCACCCCACCCCACCCAC | + | 6.67 | RREB1 | MA0073.1 | chr12:53297636-53297656 | CCCCAGCCCACCCCACCCCA | + | 6.8 | RREB1 | MA0073.1 | chr12:53297646-53297666 | CCCCACCCCACCCCACCCCA | + | 7.67 | RREB1 | MA0073.1 | chr12:53297656-53297676 | CCCCACCCCACCCACACCGC | + | 7.67 | TEAD1 | MA0090.2 | chr12:53296960-53296970 | ATGGAATGTG | - | 6.02 | ZNF143 | MA0088.2 | chr12:53297301-53297317 | TTCCCACAATGCCTCC | + | 6.01 |
|
| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_23067 | chr12:53293079-53302882 | Colon_Crypt_1 | SE_23787 | chr12:53296755-53298845 | Colon_Crypt_2 | SE_24992 | chr12:53296540-53299679 | Colon_Crypt_3 | SE_27647 | chr12:53288696-53303037 | Fetal_Intestine | SE_28539 | chr12:53288457-53303256 | Fetal_Intestine_Large | SE_31746 | chr12:53295793-53302843 | Gastric | SE_34646 | chr12:53296478-53303608 | HeLa | SE_43420 | chr12:53296705-53297615 | MCF-7 | SE_43420 | chr12:53297676-53298740 | MCF-7 | SE_47304 | chr12:53292933-53302628 | Panc1 | SE_47563 | chr12:53297064-53298856 | Pancreas | SE_50235 | chr12:53293003-53302879 | Sigmoid_Colon | SE_52377 | chr12:53291888-53302844 | Small_Intestine | SE_56763 | chr12:53296731-53299669 | VACO_400 | SE_57363 | chr12:53297031-53298834 | VACO_503 | SE_57922 | chr12:53296950-53298736 | VACO_9m | SE_65517 | chr12:53295161-53302467 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | GGGCGACAGA GTGAGACTCT GTCTCAAACA AACAAAAAAA CTTGTAACTC CTTCTAAACT 60 GGAGGGGACA GAAATCTTTT AAGGGTACAG CCTAGTTCCC TCCACCACTC TCTGCAAATC 120 GCTTTCTTCC CCAGGTCATT CTGCCCCAAA ATTATTTTTT AAAAAAAAGT GATTATAACA 180 TCTTATCCTA ATGGAATGTG GGCCAAGCAC TGCTGAACTC TTTACATATG TAAGTTTGAA 240 TAGGCAAAAA CTTTTGCCTA TATGGATTTA GGGGCTCTCA TATTCATTTT ATAGATGAGG 300 AAATAAGACT TGGCAAGGGA GTCCATAACC AGGAACCGGC AGAGCAGTGC GAACCAAGAA 360 TTCAGATTCC AAAGCCTATG CTTAGCTGCT CTCTATAAGG ACCCCAGGGC TAGCAAAACG 420 CAGTCAACAA GTCAAGTCCA GGCGCTTGGA GCGCCAAGGG CCCCCGACCA CTGGGTTCCT 480 GGGGCTCCGG TTCCTCCCGG CTTACTCTGC CCCAGGATTT CCCTCCTCCC GTTCCCACAA 540 TGCCTCCCAG GAGCCAGTCA GCGTGAAGGG CCCAATCCTC GGGGCCGCCG GGGGCCCGGG 600 GCCCCTCAGG CAGCGGAGTC CCAGGGCTGC AAAACCCGGC CTGGCTCCTG CTGTGTGAAA 660 GTGGAGCCAG GCCGCTGGGG CGGAGCAGGG ACAGGACGCG AGAAAGGGAC ACGGGCTGAA 720 TGGGCGAGGG GCGTTGGTGG GCGACCGCGT TATCTGAAGC CATAAACTTA ACAGGACGTA 780 AACCCCGGGC GGGGCGTCCC ACGCCCGCAG ACTTTGAATC CTGCATGGGC TTTCCGAGGC 840 CAGGCCCTGG CGCCTCCTCC ACCCCACCCC AGCCCACCCC ACCCCACCCC ACCCCACCCA 900 CACCGCCCCC GACGCCGAGC TCCGCCAGGT GGAGGAGAGC GTCCCGAGAC TGCTGCCCGC 960 AGCCCCTCAC CCCGCCCTCG GCCCCGCCCA CGCTGCCGGC GCAGGGGCCG GGGTATGACT 1020 CATTCTGTGA CCCCCGCACT CAGGCCTCCG GGCGCCAAAG GCCTCAATCA ATATTTGCCC 1080 GTTTGAACCG AGACACCCAC TTCCTTCTCC TAGAATGCTA GAATCACACC AAACCCCTAT 1140 GTAAAAAAAA GAAAAGAAAG AAAAAAAATC ACAAAGGCAC CACTGGGGAG CCCTTGGGGT 1200 AGTGCTGGCG AAGAGGCGAA CCTGGAGGAG GGTAGTCCCC GAACAGCTGG GACTGCCGCA 1260 GGGCGATAGC TTAAAAGACG GTCAGAACTC GGGTTGGGGT GAGAACAATA ACCGCTATTA 1320 TTTTTTATAA TTTGGGGACA GAATGACCTG AGGAAGAACG GGATTTGTAG AGAGGGGTGG 1380 TGGGAACTAG GCTGTACCCT TAAGTTGTCT CTCTCTTCCA AGACCCTCCA GTTTAAAAGG 1440 GAAGAAGGAA GCCCCAGGAT TCATCCCGGC TGTCCAGACC CTCTCCCCAC CCTCACCCAG 1500 CCCAAACCAA GGTGCACGGG AGGGGTGAGT CGGAGGATGG AAGGGAGAGT GTCGCCAGGG 1560 CGGGTGAGGC CCAGCAGGAC GCCAGCTGGG GGCTGGAGAT GTGCATAGGG ACCGGGACTA 1620 CCAGGAGAAA GGGGCTGCGG GCACAGTCAG CCACGCAGGG GGGACCCTCA 1670
|