Tag | Content |
---|
EnhancerAtlas ID | HS113-23708 |
Organism | Homo sapiens |
Tissue/cell | Keratinocyte |
Coordinate | chr22:31676070-31677570 |
Target genes | Number: 13 | Name | Ensembl ID |
|
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
JUN(var.2) | MA0489.1 | chr22:31676305-31676319 | CTGAGTCATTCCTT | - | 6.32 | RARA(var.2) | MA0730.1 | chr22:31676272-31676289 | TGACCTTTTCCTGGCCT | - | 6.23 | RREB1 | MA0073.1 | chr22:31676936-31676956 | CCACCACCCAACCCCTGCCG | + | 6.49 |
|
| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_08687 | chr22:31673702-31676767 | Brain_Inferior_Temporal_Lobe | SE_11287 | chr22:31673529-31676777 | CD20 | SE_12107 | chr22:31673469-31676425 | CD3 | SE_14631 | chr22:31673524-31677216 | CD4_Memory_Primary_7pool | SE_17430 | chr22:31672956-31691036 | CD4p_CD25-_CD45RAp_Naive | SE_17977 | chr22:31673466-31676871 | CD4p_CD25-_CD45ROp_Memory | SE_18592 | chr22:31673282-31693670 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19595 | chr22:31673435-31676722 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21528 | chr22:31673703-31676289 | CD8_Naive_7pool | SE_21928 | chr22:31673449-31676846 | CD8_Naive_8pool | SE_22539 | chr22:31673613-31676639 | CD8_primiary | SE_27355 | chr22:31673728-31677088 | Esophagus | SE_31999 | chr22:31673720-31677091 | Gastric | SE_42312 | chr22:31674025-31676781 | Lung | SE_50393 | chr22:31673685-31677280 | Sigmoid_Colon | SE_52405 | chr22:31673720-31677022 | Small_Intestine | SE_53858 | chr22:31674081-31676650 | Spleen | SE_55166 | chr22:31674080-31677019 | Thymus | SE_62272 | chr22:31668337-31710103 | Tonsil |
|
| Number: 1 | ID | Chromosome | Start | End |
GH22I031277 | chr22 | 31673975 | 31676781 |
|
Enhancer Sequence | GAGAGTGAAA ACATGATTGG CTCAGGGACA TAAATGTAGA GGGTCTGCTA GCCACCTTCT 60 GGCCTAGCCC ACACAAACTC CCCATAGCAG AGAGTTTTCA TGCACCCAAG TCTAAAACCC 120 TCAAGCAGAC ACCCATCTGC TCTAGAGAAT ATGTACATCC CACCTGAGGC AGCCCCTTCC 180 TTGCAGCAGG TGTGACTGAC TATGACCTTT TCCTGGCCTG GCTCTCACAT GCCAGCTGAG 240 TCATTCCTTA GGAGCCCTAC CCTTTCATCC TCTCTATATG AATACTTCCA TAGCCTGGGT 300 ATCCTGGCTT GCTTTCCTCA GTGCTGGGTG CCACCTTTGC AATGGGAAGA AATGAATGCA 360 AGTCACCCCA CCCCTTGTGT TTCTTTACAA GTGCTTGAGA GGAGAAGACC AGTTTCTTCT 420 TGCTTCTGCA TGTGGGGGAT GTCGTAGAAG AGTGACCATT GGGAAGGACA ATGCTATCTG 480 GTTAGTGGGG CCTTGGGCAC AATATAAATC TGTAAACCCA AAGGTGTTTT CTCCCAGGCA 540 CTCTCAAAGC TTGAAGAATC CAACTTAAGG ACAGAATATG GTTCCCGAAA AAAACTGATG 600 ATCTGGAGTA CGCATTGCTG GCAGAACCAC AGAGCAATGG CTGGGCATGG GCAGAGGTCA 660 TCTGGGTGTT CCTGAGGCTG ATAACCTGTG GCTGAAATCC CTTGCTAAAA GTCCAGGAGA 720 CACTCCTGTT GGTATCTTTT CTTCTGGAGT CATAGTAGTC ACCTTGCAGG GAACTTCCTC 780 AGCCCAGGGC TGCTGCAGGC AGCCCAGTGA CCCTTCCTCC TCTGCAGTTA TTCCCCCTTT 840 GGCTGCTGCA GCACCACCCC CGTCACCCAC CACCCAACCC CTGCCGCACT CCAGCCTTTA 900 ACAAGGGCTG TCTAGATATT CATTTTAACT ACCTCCACCT TGGAAACAAT TGCTGAAGGG 960 GAGAGGATTT GCAATGACCA ACCACCTTGT TGGGACGCCT GCACACCTGT CTTTCCTGCT 1020 TCAACCTGAA AGATTCCTGA TGATGATAAT CTGGACACAC AAGCCGGGCA CGGTGGCTCT 1080 AGCCTGTAAT CTCAGCACTT TGGGAGGCCT CAGCAGGTGG ATCACCTGAG ATCAAGAGTT 1140 TGAGAACAGC CTGACCAACA TGGTGAAACC CCGTCTCTAC TAAAAATACA AAAATTAGCC 1200 AGGTGTGGTG GCACATACCT GTAATCCCAG CTACTCTGGA GGCTGAGGCA GGAGAATCGC 1260 TTGAACCCAC AAGGCAGAGG TTGCAGTGAG GCGAGATCAT GCCATTGCAC TCCAGCCTGT 1320 GCAACAAGAG CCAAACTCCA TCTCAAAAAA AAAAATCTGG ACACAGGCTG CAGTTGTCAC 1380 TTTCCAGTAA CAGGGCGAGG ATGAATGAAG AAAAGGCCCA GAGCTTGCCA CATAGGTGTT 1440 GACAAGGTAA CCCAAAGCTT CTCAACTTAC ACGGAGGGTT CCTGTTACCC CTCAAAAACT 1500
|