| Tag | Content |
|---|
EnhancerAtlas ID | HS113-18424 |
Organism | Homo sapiens |
Tissue/cell | Keratinocyte |
Coordinate | chr19:56601550-56604250 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:56603317-56603338 | AAGCCGAAACCGAAACCGAAG | - | 6.33 | | IRF8 | MA0652.1 | chr19:56603320-56603334 | CCGAAACCGAAACC | + | 7.64 | | IRF9 | MA0653.1 | chr19:56603325-56603340 | ACCGAAACCGAAGCC | + | 6.3 | | IRF9 | MA0653.1 | chr19:56603319-56603334 | GCCGAAACCGAAACC | + | 6.67 | | LMX1B | MA0703.2 | chr19:56602633-56602644 | TTAATTAAAAT | - | 6.62 | | Nr2f6(var.2) | MA0728.1 | chr19:56601974-56601989 | GAGGTCAGGAGTTCA | + | 6.22 | | SOX10 | MA0442.2 | chr19:56602647-56602658 | TGCTTTGTTTT | - | 6.02 | | TFAP2C | MA0524.2 | chr19:56602522-56602534 | TGCCCCGGGGCA | + | 6.74 | | TFAP2C | MA0524.2 | chr19:56602522-56602534 | TGCCCCGGGGCA | - | 6.74 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_41593 | chr19:56600655-56601956 | LNCaP | | SE_41593 | chr19:56602510-56603919 | LNCaP | | SE_41593 | chr19:56603959-56605136 | LNCaP | | SE_53594 | chr19:56602501-56603939 | Spleen | | SE_69016 | chr19:56602937-56603793 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I056089 | chr19 | 56601262 | 56604657 |
|
Enhancer Sequence | AGATGCCACG CTGGCAAACA CGCAAGGAAG GGCCATGACG CCCCCCTGCG CTACACACTT 60
CAGCGTCAGG TCCTCATAAG CTGGGAGCAC AAAACTGAGC CTTTACAAGG GAGAAACTGA 120
GGCACTAGGG AGTCGAGTCA CAGCCCACAG CTACACGACT ACAAAGTGGC AATGCCCAGA 180
AGCGCATTAG TAGACTGGGT CCAAGAAACA GCCATCTACC ACTAACTGCG GCCGCCCACC 240
GCTAAATCCC CCACCCACAG GCAGCACACC CTACACGCTA AGGGAGTGCT CCACAAAGTG 300
GGATCCTGCG ACCAGTAGCA TCGGCGCCAC AGAGAACATA TTAAAAACAT TTATGCACTG 360
CCCGGAGCGG TGGCTCACGC CTGTAATCCC AGCACTTTAG GAGGCCGAGG TGGGCAGATC 420
ACTTGAGGTC AGGAGTTCAA GACTATCCTG GCCAACATGG CAAAACCCCA TCTCTACTAA 480
AAACACAAAA ATTAGCCGGG CGTGGTGGCG CATGCCTGTA GTCCCAGCTA CTTGGAAGGC 540
TGAGGCAGGA GAATGACTTG AACCCGGGAG GCAGAGGTTG CAGTGAGCTG AGATCACACC 600
ACTGCATTCC AGCCTGGGCG ACAGAGCAAG ACTCCATCTC AAAACAAAAC AAAAACGCTT 660
ATGCTCAGGC CTCCCTCCAG ACGCACTGTA TGAGAAAGTG CCGGGCCGGG CCTGTGCTTC 720
AGCAAGCCCC CCAGGTGATT CTGATGCCAG CTCCAGTGTG AGAATCACTA TTCCAAGGCA 780
GAGAGTATTC GAATATGGCT CTTGAACCTG CGGCAGAAGA AAACACTCCA GGTGAAGTCA 840
GGAAGGGGGG AGCCTTCTGG AGAGATGGCA TGGAGCCCAC TGCGTTGTCA ACATAAATCA 900
AAAAATGTTG TAAGTTATAA GCACATTACT TAAAGATGTA GAGAGAATTA AAAACAAACA 960
TCAGAAGCTA TTTGCCCCGG GGCAGTGTGA CTGAAGGGGA CAGAAAGGGA CGGGCAGGAA 1020
AGAGATTTGT TGTCACCGTA AACCGAGCCA TACTATCTGA ACCTTACAAG TGCTTCTACG 1080
CCTTTAATTA AAATAACTGC TTTGTTTTCG AAGCTGTGAA GAAAGAAAGT GTAGCAATGC 1140
TCCCTGTGAC TCAGCTATGA ATAGCATTTA TTCATGACGA CATGAATTCT GAACACAAAA 1200
CTTGTGACAC AGTGGCAGCT AAGACAGGGG CACTGGGGCG GGTGTGCAGT ACGTGGAGAG 1260
CGCAGTGAGT GGAGAGTGGG GAGAGGATGT GGGAGCCATG TCCTCACCTC CCATTAGATT 1320
TGCAACTATC AAAGCAATTT CATGAGCTCT TTACCTAGAA CCAGGGAGAA CCCCAAAGAG 1380
TGCATGGAGG GGCTCCTTCC TCTAGAGGCA AACTGGGAGT GGGGAAGGCA GGAGGTGGGA 1440
GCTGTTTTCT GCTTTAGGCC GTAGGCGATC TGGCTTCTCT ACAGGCATCT CTGCACTACT 1500
TTTTCTAAGT ACGAGTTAAG CACTGTTAAA TGGACAGGGT TTAATTACTT AAAAGGCAGG 1560
GCTCTTTTAC ATCTTGCAGA TTCCTGGGCT CTGCGCAAAC CTTCCCGTGC TGCATCTCAG 1620
TAAGGCCCAG GAAACCGCGC TTCACAGGCA CAGACTGGTT TCTGACAAGA GGCTGCGTCT 1680
GCACCGCGCA TGGGCCAAGA TGAGCCGCTC CACTTGCCGC AGCCGCAGCC GCAGCCGCAG 1740
CCGAAGCCGA AGCCGAAGCC AAAGCCAAAG CCGAAACCGA AACCGAAGCC AAAGCCGAAG 1800
GCGAAACCGA AGCCAAACGG AAGCCAAAGC CGAAACCGAA GCCGAAGCCG AAGCCGAAGC 1860
CGAAGCCTCA CCCTCACCCT CACCCTCACC CTCACAGGAG CAATGAGGCT AACAGCCTTC 1920
TCCACCTCAC AGCACCATCT TTAAAGGGAT TCAACGAATT CCCAGCAAGA GAAGAGCACG 1980
GTGAGGAGCA CAAGAGTTCT CATTCAATTA AAAAAATAAG AAACAATGAG GGCCGGGGCC 2040
ACTCTGATGG TGGCAGCAGT TACCCTTGGG GGAGGGCAGT GTCCCCAGAC GCCTGGCCCT 2100
GGGCTAAATG TGTTCCGTGG ATTACCACAT TTAATCCATG GCCAACACTA TCACTGTCCT 2160
CTCACTGAAG GACTCAGCTG AGGTCCCGAG GGGATGGGCT GGGGGGCGGT CCTCCACTCC 2220
AGATCCCCTA CGCCCCAGGC TCTACCTCTA CGCCTCCTGC CCCACCTGCA GCACCACTAC 2280
TCCAGGAAGC CCAGGTTTCC CCTCCACGGG AGATAAATGT TTCTAGAGCA AAATCTGGAA 2340
ATGCTTTTTT TTTTTTTTTT AAGATAAAAT TCCTGAGTTC ACACTGATAC TTCCCATAGA 2400
AATTCAGGAC TAAAGTTTTC ATTCATCCTT TTCTTTGTGA CATCTGCACC TCCCTTCAGC 2460
CCCACGGAGA ATCCTGGTTC TCAAGGACAT AGGGGATGAC AGAACTGGAA TATCCCACAG 2520
ACGCAGGGGA TGGCGGGAGT GGGATACCCC ACAGACACAG GGGATGACAG AGCTGGAATA 2580
TCCTACAGAC ACATGAGATG GCGGAACTGG GATACCCCAT AGACGCAGGG GGTGGCGGAA 2640
GTGGAATATC CATAGACACA AGGGGTGGCG GAAGTGGGAT CCCCATAGAC ACAGGGGATG 2700
|
