| Tag | Content |
|---|
EnhancerAtlas ID | HS113-17695 |
Organism | Homo sapiens |
Tissue/cell | Keratinocyte |
Coordinate | chr19:17217820-17219990 |
Target genes | |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| JUN | MA0488.1 | chr19:17218618-17218631 | ATGACCTCATCCT | - | 6.23 | | JUND(var.2) | MA0492.1 | chr19:17218617-17218632 | CATGACCTCATCCTA | - | 6.25 | | SRF | MA0083.3 | chr19:17218657-17218673 | TTTCCAAATAAGGTCA | + | 6.01 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_01070 | chr19:17217900-17219642 | Adrenal_Gland | | SE_01695 | chr19:17217904-17219751 | Aorta | | SE_07171 | chr19:17217875-17219856 | Brain_Hippocampus_Middle_150 | | SE_09204 | chr19:17217853-17225810 | CD14 | | SE_11414 | chr19:17210931-17224728 | CD20 | | SE_32165 | chr19:17217911-17219588 | Gastric | | SE_32675 | chr19:17215550-17218465 | GM12878 | | SE_42559 | chr19:17217842-17219831 | Lung | | SE_44945 | chr19:17217893-17219831 | NHLF | | SE_45910 | chr19:17217694-17219939 | Osteoblasts | | SE_50282 | chr19:17217887-17219656 | Sigmoid_Colon | | SE_52769 | chr19:17217885-17219586 | Small_Intestine | | SE_53370 | chr19:17217871-17219778 | Spleen | | SE_59337 | chr19:17188995-17222500 | Ly3 | | SE_62772 | chr19:17177847-17247718 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 17218539 | 17219391 | | chr19 | 17218276 | 17219491 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I017106 | chr19 | 17217795 | 17222204 |
|
Enhancer Sequence | CAATATCGCA CCATTGCACT CCAGCCTGGG CAACAAGAGC GAAATCTGTC TCAAAATTAA 60
AAATAAAAAT AAAAAATTAG CCAGGCATGG CAGTGCATGC CTGTGGTCTC AGCTCTCAGG 120
AGCTTGAAGT GGGAGGATTG CTTGAGCCCA GAAGTTCAAG ACTGCAGTGA GCTGTGATCA 180
CACACTGCAC TCCAGCCTGG GTGACAGAGC AAGACCCTGT CTCAAAAAAA TAACAAAAAA 240
AATTTAGTAG GTGAATGAAT GAGAGGGTAG ATCCAACATT TACCATGTCA GACATTTTGC 300
CAAATGGGAC TAGGCAGGTG GGTAAATGCC TGAGCCCCGC AGAAATGACA CGCCCAGCCC 360
CAGGGTCTCA AAGTGGCACG GCCAGGAGGC AGGATTGCCA CCTAGGTCTC AGTTCAGGGT 420
CCATGTCCTC CCCACCACGT TGCTGCCTCC ACAGCGCCAT CTCACTAGGA CCCTCCAGGG 480
CGTGGACAAG TTTCCTGTTG CTAAGTGTTA GGGGCAAGGG AGTCTCCAAC AACAGGGATT 540
AAGGCTCTCA TGGTCCTGGA GGCCAGAAGT CTGAAATCAA GGTGTCCACG GGGCCGCACT 600
CCCTCCCGGC TCTGGGGGAG GATGCTTCAG GCCTCTTCAG CTTCTCTGGT GGCTGCAGAT 660
GTGCCCTGGC CTGTGGCCAC GTCACATCAG TCTCTGCCTC TGTCGTCAGG GGCGTTCTTC 720
CTGTGTGTCC ATGTCTTCAC GTGGCTTTCT TATAACAAGG ACACCACTCA TGGGATGTAG 780
GGCCCATCCT ACCCCGGCAT GACCTCATCC TACCTAATTG CATTTGCAAA GACCCTATTT 840
CCAAATAAGG TCACATACAC AGTTTCTGGG GGTGAGGATG TGGATATAAT TTTGGGGGCG 900
GGGGGCTCAA GTCAGCCCAC AGCATCCCCC ATACAGCCCC ACCTGGTCTG CTTCAAGTCC 960
TACCTGGCCC CTGGCAAGTC CCACTTGGTG ACATCTTGTG CCTGGGTCCT TGAGGGCTGC 1020
CCCAGATCCG CGATTGTCCT GGGGACCGGT AGTTCCTCCC CGGATGCCAG CAAAGCTCCC 1080
TCCAGCCTCC ACGCCTGCAC AGTCTCCAGT ATGCCTTCAA CAGCCATTAG TCACCCTCTG 1140
TGAGTCAGAC CCCCGGTCCT GCCAGGCCAA CCTGCTTGGG GCCTCAGCAG CGGGGGCTGG 1200
CGAGGCCAGT TTTCTCCAGC GGTTCTAAGC CGCTCGAGGG TGGTGCCCAC GCCGGCTTCC 1260
AAAACAGGCT TGAGCCAAAT CCACGTCATG GCAATAAACG TGCTTCCTGG GGCGACTGTT 1320
TGCAAAGGGA TGTGATTGTC TTCACTGAGA GCTGGATTTC TCAACCTGGC TCTGCTGACA 1380
TTCAGGGCCG GATCGTTCTC TGGGGAGGGA GTCATCCTGT GCATTGAAGG ACATTGAGCA 1440
GCATCCCTGG CCTCCACCCA CCAGATGCCA GGAGCACTCC CCACCCCGCA GGTGTGACAC 1500
CCAGAAGTGT CCCCAGACAT TTCATTGATT AGAGAGGTAT TAACAAAATA GCTTCCCGTT 1560
GTCCCCTGGG GACAAATCAC CCCCTGGGAA TAGAACAGCT GTCTTTGAGT TCTTCCCATA 1620
AGACCCAATC ACTGTTCATT GCAGCCACTG AGCTTTTAGA AATTATCTGT GAGTTCTTTC 1680
TGTTCTGTGC TAACTTAAGA GTCATTTTCT TTTTTTCTTT TTTTGAGATA GAGTCTTGCT 1740
CTATCGCCCA GGCTGGAGTG CAGTGGCACG ATCTCGGCTC ACTGGAACCT CTGCCTCCTG 1800
GGTTTGATTC TCCTGCCTCA GCCCTCCCGA GTAGCTGGGA CTACAGGCGC CCACCACCGT 1860
GCCCGGCTAA TGTTTGTATT TTTAGTAGAG ACGGGTTTCA CCATAGTGGC CAGGCTGGTC 1920
TCAAACTCCT GACCTCAAGT AATCTGCCCT CCTCAGCCTC CCAAAGTGCT GGGATTATAG 1980
GCGTGAGCCA CCATGCCTGG CCCCAAGAAT CTTTTTTTTA ATTTTATTTA TTTATTTATT 2040
TATTTATTTA TTTATTTATT TATTTATTTA TTTTGAAACA GAGTTTCTCT CTGTCTCCGG 2100
GCTGGAGTGC AGTGGCGCGA TCTCGGCTCA CTGCAAGTTC TGCCTCCCGG GTTCGTGCCA 2160
TTCTCCTGCC 2170
|
