Tag | Content |
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EnhancerAtlas ID | HS113-16426 |
Organism | Homo sapiens |
Tissue/cell | Keratinocyte |
Coordinate | chr18:12003680-12006880 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GLI2 | MA0734.2 | chr18:12005727-12005742 | CCGCGTGGGTGGTCT | - | 6.46 | Nr2f6(var.2) | MA0728.1 | chr18:12004742-12004757 | TGAACTCCTGACCTC | - | 6.22 | STAT1 | MA0137.3 | chr18:12006134-12006145 | TTTCTAGGAAA | + | 6.14 | TBP | MA0108.2 | chr18:12003699-12003714 | GCCGGGTTTTTATAG | - | 6.86 | TFAP4 | MA0691.1 | chr18:12006521-12006531 | AACAGCTGAT | + | 6.02 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_23131 | chr18:12003650-12004343 | Colon_Crypt_1 | SE_23131 | chr18:12004661-12007002 | Colon_Crypt_1 | SE_23828 | chr18:12003745-12004266 | Colon_Crypt_2 | SE_23828 | chr18:12004773-12006909 | Colon_Crypt_2 | SE_25040 | chr18:12003665-12004430 | Colon_Crypt_3 | SE_25040 | chr18:12004601-12007001 | Colon_Crypt_3 | SE_26608 | chr18:12003616-12004386 | Esophagus | SE_26608 | chr18:12004648-12006956 | Esophagus | SE_31757 | chr18:12003667-12004371 | Gastric | SE_31757 | chr18:12004501-12007585 | Gastric | SE_47528 | chr18:12003719-12004293 | Pancreas | SE_47528 | chr18:12004997-12005401 | Pancreas | SE_47528 | chr18:12005519-12006001 | Pancreas | SE_47528 | chr18:12006071-12006900 | Pancreas | SE_50470 | chr18:12003585-12004290 | Sigmoid_Colon | SE_50470 | chr18:12004706-12007618 | Sigmoid_Colon | SE_65647 | chr18:12004952-12013930 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr18 | 12005208 | 12005369 | chr18 | 12005666 | 12005763 | chr18 | 12003845 | 12004266 | chr18 | 12005045 | 12006327 | chr18 | 12006613 | 12006712 |
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| Number: 2 | ID | Chromosome | Start | End |
GH18I012003 | chr18 | 12003141 | 12004430 | GH18I012004 | chr18 | 12004667 | 12007576 |
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Enhancer Sequence | AAAAAGGCAG CATGGTAAGG CCGGGTTTTT ATAGATTGGG TCTTTGGAGT GTGCTGTTGG 60 CCTTGGCCAC ATAGCTGTCT CCTGCCATGC CCTGGCTTTG TGGGGCGCCT AAACCTGTTT 120 TCAGATGATG ATTTTGAGTG AGATACAAGT GTAGCTACTT GGAAAAGATT CAGTAGCATC 180 CCTGAGCTAT AGTGATAGAA ACCCCGTCCT TGTCCCTTCT GTGGAGCAGC CTGTTGGAGC 240 TTCTCTGGGT TGGCCTAGGC CCAGAGATGA GGTCAGCAGC TCAAGGGTCT AGTGTTTTTA 300 GCTGTCTTCC CAGCCCTGCT CCAGAGCCCC CATGTAACCT GCTGCCCTGC AGTGCCCAGC 360 ACAGAGCAGT GTCTGTTGAA TGCGTGAGTC AAGCAAAACA TCAAACAGAA TCCTTGACAT 420 GGGAAAAACA TGCTCCCAGC CACCACCAGC TGAACATTGA CATCCAGCTG CTTTCCCACT 480 GGGCAGTGGC TTGTGAAGAT GGGGACAGAG TATCATAAAT CATCTCCTTT GTGGACAGCA 540 GGGATGATCC TGACCTTCTT GTCACAGACT AAACAGACTA AGTAGCCAGA AGAAAAAAAA 600 AGAAAGAAAG AAAAAAGGGG CTTAAAGGCA CTCAGCTGTC AAAATTATAA GGAGGGTTTG 660 TTAAAACTAT TTTTTAAAAA AGAAAAGTGG TTAAGTTATG CAGTAGGATA TAATATTCTA 720 TAATAACTTA TTACCAAACT TTTAGCCTTA ATCCAGTTGC TATTTTCCTC TTGTCTATTG 780 GATAGACGTA TGGAATGTTC TTTTTTTCCC TAAATTTAGT CATGTGCATT TTTTTTCCTA 840 TTTATATTGT GGGTTTTTTT TTTTTTTGAG ATGGAGTCTT GCTCTGTAGC CCAGACTGGA 900 GTGCAGTGGT GCAATCTCTG CTCACTGCAA CCTCCGCCTC CCGGGTTCAA GCGATTCTCC 960 TGCCTTCCAA GTATCTGGGA TTACAGGCAT GCACCACTAT GTCTGGGTAA TTTTCATATT 1020 TTTAGTAGAG ACGGGGTTTC ACCATGTTGG CCAGTCTGGT CTTGAACTCC TGACCTCAAG 1080 TGATCCACCC ACCTCAGCCT CCCAAAGTGC TGGGATTACA GGCGTGAGCC ACCGTGCCCT 1140 GCCTATATTG TGGATTCTAT GTAGATGTTC CAGTGGCTTT TAGGAAGGTC TTTATGATTT 1200 CACACATCTG TCTACAGTCA TGTCTGCAGA GCAGACTCTC CCCACTCCCT CTGCAGACAG 1260 CTGTAAAACA TTGTCTTTCA TCTCACAGGT ATTAGCTTCC TACATGAGTA AAATCAGGTT 1320 TAAGTGAATA AAAATTGTGC ATCTCTTCCC ATGTACCAGG GAAGTATTTT TGGTGCCTCC 1380 AAAGACCGAG CACGGTTCAC GCCTCTGCTG GCCTTCACAC CGCTGCAGCC ACACAGTGCA 1440 GAAGCCTGCT CCCTGCTGCC CACAAGCATG AGGCAGGTGG GAAGGGGGAT GCTCGTGCCA 1500 CCTTGTAGGC GGGCAGGCAG TCTCATGGGC AGAGGTGTAC ACAAGGTGGG TGATGAGGAA 1560 GACAGCTCTA GGGTATGAAT GATCAGCTGC TGAAAAACAT CCAGTGCTCA GTGTGGGTAC 1620 TTAGAGTTAT TCTCATAAAA AATGTGAGGC AGAGTTAGTC AGGTGTGGTG ATGCATGCCT 1680 GTGGTCCCAG CTACTCAGGA GGCTGAGGCA GGAGGATTGC TTGAGCCCAG TGGTTTGTGG 1740 CTTCAGTGAG CCATGATTGT GCCACTGCAC TCCAGCCTGG CTGACAAAGC GAGACCATGT 1800 CTCCAAGAAA AAAAAAAAAA ATTTCTAAAA GTACTTGCTG GGTTACACTA AATGAAACCT 1860 AAAAAACAAA TAGATAAATA ATAAAGGTTA CACACAGCAG AAGCTTTGTT AACAAATTAA 1920 CTTATATTAA TAGTTGCTGC TGGGAAAACA AGCTGCTTGG TGACTTCCCT AAAGGGTGTC 1980 CCACGCATCT GGCGAATGAA CAGACAGAGC TCCTGCTCCC GAGTGTCCTG GGAGGCACGT 2040 GGGCATGCCG CGTGGGTGGT CTGGGTGCTG CAGCGTGAGT TGTCCTGGGT GTGGAGTGTC 2100 AGTGCCTGCA GACCCACACT GCCTCCTCCT TCAGGGCTCA CTGGCAGTTT TCTTTCCACC 2160 GCTTCAGTTT CCTACTTGAA GTCAGGTTTA AAAAGGAGAA GAATTGCACA TTCCTCCTCA 2220 GTTTCTTAGA AACTTACCTT TGTGCCTGAG TCATTTCTAG TCCCTCTGGA CCTGAGTCAT 2280 ATCTGTTCGC TGCTTTGTCA ACCTTGTGCC CAGTTTAAGC TTTCGTAGTT GCTCCTTGTA 2340 TGTGTGTTTT CAGGGTGTGG AGCGTTTTCT TTAAAAACGT CATTGCAAGC CATTACAGAA 2400 GAGGAAAGTC ACATAGCTAC AGAAGACATG GAAAAACAGA TTTAGTGCCT GAAGTTTCTA 2460 GGAAAACTGG CAGTGCTGAC AGCACTTATG ATCACGCCCT AAGTGGAATC ATCACCTGTG 2520 TGTCTCCTGC AGGCTGCTGT TGTCAGGAGG CAGCCTCTCC ACCCCCTGCC CCGGCTGCCA 2580 TTGTGGCTTC TACCCACCAT TTTTCCTCCT AGATCTGTTT GGGGAGCACC AGTTCCTGAG 2640 CAGGGGCTCT GGCTGGTGGG CCTGTGCATC ACCTGACCTA GAAGCATGTG GACAACTGAG 2700 AGTGGAGAGG CAGTTCCTGC AAGGAGCAAG GCGTGCAGTG TAGATGAAGA ACCAGAAGCC 2760 TGGGTTCACT GCATCTCATC TGCCTTGCCT GGCTAGGCTG AAAGCTCCAG GGGCAGACTG 2820 AGCCTGCCCA GGCTCTCCAG GAACAGCTGA TGATTCCTTG GGTGTCTTGC TTAGTGCTCC 2880 TGGCTTGACT TGACCTGGTC TTCTTGGCTC AGAAGCCCCT GCTTATTCGT GGGTTTCTCC 2940 AGGGGGCCGG GGAGGAGGTC GCACAGCCTG AGATGATGTA TGCGTGCACT TGTCGTATCC 3000 CAGGGTTGTA TTTCTAGATA ATTTATCAGC AAAATGGAGG GGCTGGATGA CTCTGCATCC 3060 CAGGCATGAA CTTCATAACC CAGCAGTGGA AGGATGGTCC CAGAGTGGAT GGGGACCAGG 3120 GTGGTTACAG TGTGTATGGC AGCTCCCGTG CATAGAAAAG TGACATCGGG CCAGGCGTGG 3180 TGGCTCACGC CTGCAATCCC 3200
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