EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS113-03413

Organism

Homo sapiens

Tissue/cell

Keratinocyte

Coordinate

chr1:218661060-218662280

Target genes

Number: 3
Name	Ensembl ID

RRP15	ENSG00000067533
RP11	ENSG00000223375
TGFB2	ENSG00000092969

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_02323	chr1:218661099-218663304	Astrocytes
SE_34115	chr1:218661078-218664176	HCC1954
SE_36549	chr1:218660839-218662650	HMEC
SE_37059	chr1:218660551-218664347	HSMMtube
SE_38564	chr1:218660474-218662201	HUVEC
SE_45788	chr1:218660371-218663536	Osteoblasts
SE_51738	chr1:218660579-218664199	Skeletal_Muscle_Myoblast
SE_56115	chr1:218661089-218662327	u87
SE_63527	chr1:218660565-218664255	HSMM
SE_68133	chr1:218622758-218673720	TC32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I218487

chr1

218660391

218664010

Enhancer Sequence

AACCCGGGAA GTGGAGGTTG CAGTGAGCTG AGATCGCACC ACTGCACTCC AGCCTGGGTG 60
ACAGAGTGAG ACTCCATCTC AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAC 120
CATGTTTAGG TGCCAGAAAT TCCTTCTAGC TGAGTAATGA ATGTTTCTGA GTATTAAATA 180
ATCACAGTCA CTGGAAGTTA GAAAGGATCT TAAGACTATT GATCTCTGTG ATCTTATTTT 240
ATATTCAGGG AACTGAATTT TAAAGAGGTA ATGGCTTTCT GAAGGCTCCC ATAGCAGTCA 300
GGAGCAGGAA CAGAAGTCTT TCCAAGATAA CACTCAGTTA TCATCATCTT TGGGTAAAGT 360
CAGAGGAAAA TGAAGGAAGG CTTTGCCCTT ATGAGGGTTA TATAACAATG TGATAGTTAT 420
TGGCCACCTC ATTAGTTAAC AAGCATAGTA GAGATATTTC CAATGGAAAA CAAGCCAGAT 480
TCAGACATTG ATACGACCTG GATGATTCAA AGATGAGTGT TAAGAGACAT CAAGTAGGGT 540
GATGATGGAG ATGCAAGCTG TTATTAAAAC AACCCCTTGC CTTGTCATGG CCACAGCCTT 600
CAGTCAGTGA GCTCACAGAG GTCTGGCACT TTCTTCCATT TGGTATCTCC AGCATTTGGA 660
ACACTGTCTA GCTCACATTA GTGAATGTGT TTCGAATGAA TGAAGGGTCT GATGAGAGAG 720
AGGTGACTAA ACAAGTATGG CTTTGTAATT AAGAAAAGAA AGGAAGAGAG AGAGAAAAAA 780
TAAATAAATA GCAAAAACCA AAACTCAAAT ATATTTTTGA TACTGAGTTA TAAACATATA 840
GTGTCTCATT AAGGCTTTGT TAAGTAAATC TGGCTTGGGA AATTGTACTT CAATCACTTA 900
GATATGAAAT ACGAGGGAAA GATGAGTAAA CTACACAGTA TTGACCACAC AAACAGTGAG 960
TGAGAGACCA GATACAATCT ACCCAAAGCT GGACTCCTGG GTATATATTT GCCCAATTAT 1020
TTATTTATTC ATTCATTCAT ACAACACCTG CATAAGTGCC ATTTGGTTCG ATACAAAACT 1080
GACAAGGTGA CTACTTTTAA GGAGCTCACC ATGTATCTAC TCCAAATATA TTCAGCGACT 1140
TCCCTCTCCA CCCCCACTCT AAATGTGTAT GTTCTATAGC ATAAAATAAA ATGAGAAAAT 1200
ACTAAAAAGA CAACATTTTA 1220