EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS113-02368 
Organism
Homo sapiens 
Tissue/cell
Keratinocyte 
Coordinate
chr1:153507840-153508420 
Target genes
Number: 40             
NameEnsembl ID
IVLENSG00000163207
SPRR1AENSG00000169474
SPRR1BENSG00000169469
SPRR2EENSG00000203785
SPRR2BENSG00000196805
SPRR2GENSG00000159516
PRR9ENSG00000203783
RP1ENSG00000230779
LORENSG00000203782
PGLYRP3ENSG00000159527
PGLYRP4ENSG00000163218
S100A9ENSG00000163220
S100A12ENSG00000163221
AL591704.5ENSG00000237008
S100A8ENSG00000143546
S100A7AENSG00000184330
S100A7ENSG00000143556
BX470102.3ENSG00000238279
S100A6ENSG00000197956
S100A5ENSG00000196420
S100A3ENSG00000188015
S100A4ENSG00000196154
S100A2ENSG00000196754
S100A16ENSG00000188643
S100A14ENSG00000189334
S100A1ENSG00000160678
CHTOPENSG00000160679
S100A13ENSG00000189171
SNAPINENSG00000143553
ILF2ENSG00000143621
RP11ENSG00000235015
INTS3ENSG00000143624
SLC27A3ENSG00000143554
GATAD2BENSG00000143614
DENND4BENSG00000198837
CRTC2ENSG00000160741
CREB3L4ENSG00000143578
SLC39A1ENSG00000143570
RPS27ENSG00000177954
TPM3ENSG00000143549
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
SP2MA0516.2chr1:153507910-153507927ACTAGCCCCGCCTCCTT+6.16
SP4MA0685.1chr1:153507911-153507928CTAGCCCCGCCTCCTTT+6.13
Number of super-enhancer constituents: 17             
IDCoordinateTissue/cell
SE_02992chr1:153505256-153509805Bladder
SE_23261chr1:153504005-153510310Colon_Crypt_1
SE_23926chr1:153504577-153510216Colon_Crypt_2
SE_25303chr1:153504542-153510272Colon_Crypt_3
SE_27244chr1:153504541-153511424Esophagus
SE_28418chr1:153503754-153509884Fetal_Intestine
SE_34563chr1:153504562-153511814HCT-116
SE_34861chr1:153504183-153511816HeLa
SE_36529chr1:153505639-153509599HMEC
SE_42984chr1:153504009-153510224Lung
SE_45398chr1:153504632-153509472NHLF
SE_50326chr1:153503987-153511480Sigmoid_Colon
SE_52579chr1:153504053-153510359Small_Intestine
SE_57480chr1:153505212-153509794VACO_503
SE_58061chr1:153508008-153509263VACO_9m
SE_65027chr1:153505280-153509814NHEK
SE_68094chr1:153505033-153542157TC32
Enhancer Sequence
CAGCAGAGGG CCTAGTCAGT GCCATGGGAG CAAGGACTTC TCACCCACAC ACCCCAATAA 60
TGCTGCCTGC ACTAGCCCCG CCTCCTTTGG AACCACCCAG TCTCAGGCCA CACACAATGG 120
CATCAGGAGA CAGCCCAGGG CTTGAAGGGG AAGGAGAGAG CACACTAGGG CCAAGGCAAG 180
AGAGGTGGCT TAAGGATTCT AAGAAGCATA TAGGAACAGT AGCTTTGGGC ACAGCTGAGA 240
ACTGTCCTTC AGGGGATCCA GAAGTTGAGG AGTATGGCTG GGCAGGGGAG GGGAATGGAG 300
GCTGCAAAGG CAGCTTAAAC ACAGCTTCAC AGGGCCACAC ATGGTGGCAA TGACACACCC 360
AGGGCACTCC CTTCCGCACC CCAAAAGAGC ACACCCCATT GCGATCCCTT AGCCCAAGGC 420
CTGCCTGGCA CAGCACTGCT GCTCCTGACT ATCCCTCCAG CGGGGGAGCG CCACAGATGG 480
CCCCAGTCTG GATCCAGCGG CTGAACTGGG CAGGGGATGG CTGGACCCCC AGCGTGAGGG 540
CAGCTGGCCC TGGAAAGTAC CCAGGGCTCC TGGAGAGAAC 580