EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS111-03545

Organism

Homo sapiens

Tissue/cell

Coordinate

chr3:49028350-49028660

Target genes

Number: 26
Name	Ensembl ID

MIR711	ENSG00000211535
COL7A1	ENSG00000114270
NCKIPSD	ENSG00000213672
SLC25A20	ENSG00000178537
ARIH2	ENSG00000177479
C3orf71	ENSG00000221883
RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
Y	ENSG00000199546
C3orf62	ENSG00000188315
USP4	ENSG00000114316
GPX1	ENSG00000233276
TCTA	ENSG00000145022
RHOA	ENSG00000067560
NICN1	ENSG00000235261

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

USF1	MA0093.2	chr3:49028417-49028428	ACCACGTGACC	+	6.32
USF2	MA0526.2	chr3:49028415-49028431	TGACCACGTGACCTCT	-	6.76

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_08613	chr3:49026349-49029943	Brain_Inferior_Temporal_Lobe
SE_32202	chr3:49026385-49029391	Gastric

Enhancer Sequence

AGTCCGCCAG ATACTCCTGG GAAGGGCCAG GGGCTGCGGT TTGGTGGCCA CCTTGAGGCT 60
CGTTGTGACC ACGTGACCTC TATTTTGAAA ATGGCTGCTT CAGAGCAGCC CTTCCAGAGG 120
ATTACCAAAG TGAAGGACCT TCCCCGTCCT CGAAATAGGG TAACACTCCC TCTTATCCCA 180
ACTCCCTGCA GTCCATTCTT CCATCACAGG GCTGGCAGGG TGAGCCTGAG GCTGGTGTCT 240
AAACGTTTCA TTGCACCTGT CTTCCGTGCC ACCATTAATT CTGTCACCTT CTAGAACTGG 300
GAGGAAGGTG 310