EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS111-02483 
Organism
Homo sapiens 
Tissue/cell
KB 
Coordinate
chr19:2061240-2062710 
Target genes
Number: 9             
NameEnsembl ID
TF binding sites/motifs
Number: 7             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
KLF14MA0740.1chr19:2061625-2061639GTGGGGGCGTGGCC-6.39
KLF16MA0741.1chr19:2061627-2061638GGGGGCGTGGC-6.62
NRF1MA0506.1chr19:2061461-2061472GCGCCTGCGCA+6.62
SP1MA0079.4chr19:2061626-2061641TGGGGGCGTGGCCAG-7
SP3MA0746.2chr19:2061626-2061639TGGGGGCGTGGCC-6.57
SP4MA0685.1chr19:2061624-2061641TGTGGGGGCGTGGCCAG-7.22
SP8MA0747.1chr19:2061626-2061638TGGGGGCGTGGC-6.11
Number of super-enhancer constituents: 61             
IDCoordinateTissue/cell
SE_00410chr19:2057482-2062843Adipose_Nuclei
SE_00833chr19:2061213-2061421Adipose_Tissue
SE_00877chr19:2057377-2063187Adrenal_Gland
SE_02925chr19:2058894-2062211Bladder
SE_03565chr19:2059329-2061508Brain_Angular_Gyrus
SE_03565chr19:2061563-2062310Brain_Angular_Gyrus
SE_04258chr19:2059048-2062629Brain_Anterior_Caudate
SE_05392chr19:2057445-2062931Brain_Cingulate_Gyrus
SE_06065chr19:2053382-2063118Brain_Hippocampus_Middle
SE_07327chr19:2058926-2062655Brain_Hippocampus_Middle_150
SE_08493chr19:2058994-2062849Brain_Inferior_Temporal_Lobe
SE_08907chr19:2061636-2062109Brain_Mid_Frontal_Lobe
SE_10185chr19:2060440-2062453CD19_Primary
SE_11985chr19:2060193-2062346CD3
SE_12564chr19:2061168-2061414CD34_adult
SE_14045chr19:2058189-2062896CD34_Primary_RO01536
SE_14636chr19:2054700-2063085CD4_Memory_Primary_7pool
SE_17004chr19:2059666-2062401CD4p_CD225int_CD127p_Tmem
SE_17917chr19:2055109-2063028CD4p_CD25-_CD45ROp_Memory
SE_19564chr19:2059508-2062503CD4p_CD25-_Il17p_PMAstim_Th17
SE_20037chr19:2059959-2062596CD56
SE_20925chr19:2057468-2063086CD8_Memory_7pool
SE_22582chr19:2059784-2062601CD8_primiary
SE_23148chr19:2057398-2061583Colon_Crypt_1
SE_23148chr19:2061614-2062831Colon_Crypt_1
SE_23772chr19:2060305-2062706Colon_Crypt_2
SE_25156chr19:2059004-2062763Colon_Crypt_3
SE_26566chr19:2055360-2062624Esophagus
SE_28069chr19:2058954-2063077Fetal_Intestine
SE_29067chr19:2058911-2063166Fetal_Intestine_Large
SE_29903chr19:2058926-2063002Fetal_Muscle
SE_31409chr19:2057407-2062791Gastric
SE_34292chr19:2046713-2063146HCT-116
SE_34839chr19:2053410-2063219HeLa
SE_39943chr19:2054695-2062937K562
SE_40728chr19:2056809-2063147Left_Ventricle
SE_41572chr19:2060377-2062945LNCaP
SE_42204chr19:2055356-2063001Lung
SE_46685chr19:2060442-2061505Ovary
SE_47494chr19:2059009-2062521Pancreas
SE_48086chr19:2055360-2066212Psoas_Muscle
SE_48699chr19:2058907-2062856Right_Atrium
SE_49469chr19:2058951-2061585Right_Ventricle
SE_49469chr19:2061603-2062535Right_Ventricle
SE_50075chr19:2055346-2062925Sigmoid_Colon
SE_51187chr19:2054517-2063018Skeletal_Muscle
SE_52407chr19:2055358-2062782Small_Intestine
SE_54018chr19:2055333-2063065Spleen
SE_54890chr19:2057277-2062771Stomach_Smooth_Muscle
SE_55272chr19:2060195-2061553Thymus
SE_55272chr19:2061595-2062553Thymus
SE_57445chr19:2060383-2061559VACO_503
SE_57445chr19:2061657-2062540VACO_503
SE_57963chr19:2060416-2061531VACO_9m
SE_57963chr19:2061675-2062493VACO_9m
SE_59032chr19:2040556-2063003Ly3
SE_59944chr19:2041147-2096724Ly4
SE_60429chr19:2041140-2096762DHL6
SE_65305chr19:2053935-2063219Pancreatic_islets
SE_68856chr19:2059177-2061623H9
SE_68856chr19:2061639-2062884H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1920613562061737
Enhancer Sequence
GCGCCTTTGA AATCCGCAGA GCCACGGGTC GGGCCCTCCC GCCCCGCCCG CCGACCGCAC 60
CCGCGCTAGG CCAGTCCCCG GGCGCCGCCT CCTCCTCCTC CCGGCGGCCG GGGCTCTGGG 120
CGCCCCCCAC ACGGTGTCCC GGGGTGACAG GAGGGTCGGA GAGCACGGAC TCGGGGGTCC 180
GGGCCGCGCG CCCTGGGAAC CCCCTCCCCG GCGGCGGCCG CGCGCCTGCG CACTGGCTCC 240
AGTGCCGGGG CCCCTTTGCC CCGGGGACGG GGAGAGGTTG CCGGGGCAAC GCGTTTGCGT 300
CAGCGAACCT GGCGCGGCGC CCGGGCTCAG AGGGCGAGGG AGGCGGGGCC CGGGCTCTGG 360
ACCAGTAGGA CTCCAAATAT TTAGTGTGGG GGCGTGGCCA GAGATCACGC TCCAGCCAAT 420
GGAATTGTTG TTGTCGGGGC CGCGCGATCA GGGCCTTGTG CCTCTTAAAG GGACCGTGCG 480
CATTACTCCA CACTTCGCTC GCCGCTGTGT TCTGGGCGGA GGCCTAGGGC TCAGGGTTGG 540
GGGTCAGTGG GCCTGGCTGG GGGCAGAGGT AAGGGAGGGC GCAGACTCGG AGTTGGAGGT 600
CAGCGGGCCG GGCCCAGCCC CACGTCCTCC TGTTTTGCCC GTTTGTGTGA CTCTGGGTCC 660
GGTCTCGGTC TCCCGAGCTT CAGTTTCCGC AGGTGCACAG AGCTGGAGTT GCGGAGTTGT 720
GGGCGCGATG CATTCACGGC TACTCCTCCC CTGGCGGGCG CCCCTGCATT TATGCAGCGC 780
CCACGTTTTG CACTAGCACC CTATGCAACG ACCGGTCTCT CTGCAGGTCA CAGAGGAGCT 840
GGGGGGGGTT GGGGGACCCC AGAAGGTGAC CAGGCCTGGA TGACCAGGAC TGAACCGCAG 900
GCCTTGGCCC TGCACCAACA CCTCTTCCTC TGTGGCCAGG AAACATTCCT TCCAAGGACC 960
CCTACTGGAG GGGGTGGGAG GGTTGGTCCC CCAGGTCCTC CAGGTCCCGG GCGCTGTGCA 1020
ACTGAGTGAA AGCACAGAGG CAGGTGGTCA GAATCTGACC CCCAGCGGCC ACAGCCACAA 1080
CCCCTCACCC CAGGCAGGCC TCACTCTCCA CTGTAGCCCT GATCAATGAA TCACAAGTGA 1140
GGGGCAGGAA ACGAGATTGA AGGACCCACG GTGTAGACAG CAGGGGAGGT GACCCCACCA 1200
ACCCACCCAT CTGGCACCCT CTACGTCCCA AGTCTGGAGT GTCCCAGTGG CAGCCCTCAG 1260
GGCATGGATA GGCTGGAGGC CCGGCACCCC TGCCGAGGCT AGCCTAGAAG AATGGGGGTG 1320
GCCCCTTTGG CCATGGGAAG TGGTACATTC ACAGATCGCG GGAATGACAT GGGCATCTTT 1380
GGGGGCTGTG ATTCAGCCGA CCACAGAGTG TCTCAGGCTT CCCCCAAGGA TCCCATCTTC 1440
ACCATGTACC GCCCTCCTGC TGGGACCTTG 1470