EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS111-01172

Organism

Homo sapiens

Tissue/cell

Coordinate

chr12:53472410-53473090

Target genes

Number: 18
Name	Ensembl ID

RP11	ENSG00000257616
KRT78	ENSG00000170423
RPL7P41	ENSG00000241146
KRT18	ENSG00000111057
KRT8	ENSG00000170421
EIF4B	ENSG00000063046
TENC1	ENSG00000111077
SPRYD3	ENSG00000167778
IGFBP6	ENSG00000167779
SOAT2	ENSG00000167780
VTI1BP3	ENSG00000258074
HIGD1AP1	ENSG00000258016
ZNF740	ENSG00000139651
ITGB7	ENSG00000139626
RARG	ENSG00000172819
MFSD5	ENSG00000182544
PFDN5	ENSG00000123349
C12orf10	ENSG00000139637

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr12:53472990-53473000	GCCCCGCCCC	+	6.02
MYCN	MA0104.4	chr12:53472690-53472702	CACCACGTGGCC	+	6.07
MYCN	MA0104.4	chr12:53472690-53472702	CACCACGTGGCC	-	6.07

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_56430

chr12:53472238-53475574

u87

Enhancer Sequence

CATCCACTAA GTCGGTAGCA GCGCCGATGG ATGGGGGTGG GATGATCCAG GTATTTAAAC 60
AACCATCAGT CCCTACATAT AAATGAATGA ATGATTTTTC CTGGGAGCCA AAAGTGAGAA 120
AGAGGTGAAG TACTCTTCTC TTCCCATTCC CTAAACACTG GGACAGGGGT TTTCTTGAGG 180
CCTGACATTG CCTTGCACAC GGTAGGTGCT TAGTAAGCCT TGGCTGGGCT GAATTTGATC 240
CCAATACGCA AATTACGACT CTTATGCAGT AGCTACAACC CACCACGTGG CCCAGAAGAG 300
TAGGCACCTG TGGGACAGAC AGCCCTAAGA TTCCACTCCC GGGCACTCAG CCAGGACTCA 360
ACCCCAGGTA GATGCTGGTT GCGCAGACCC CACAGTCTTG GCACCGGCGA GTGGCGGCCC 420
TACTGGGCCC TGTCTCCTCC CCGGGCACGG CCTGATCACT GAGATGAGAC CCGGGAGCAG 480
CCGGGCCCCA GCCCATCCGT GTGCCTACGC CCAGTCTCCC CAGGCCCTGC ACTGGGCCGA 540
GGGTGCAGCA ACAGAAGAAG CCCAGTGACC AGAGCGCAGG GCCCCGCCCC TGGCCCCAGA 600
GCCCCCGCCC AGGACCCCCG CCTTCCGCTT CAGGCTCCGG GGAGATACGA GGCCTCCGGG 660
ACCCCGCCCC CGATCCCCGC 680