EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS111-00102

Organism

Homo sapiens

Tissue/cell

Coordinate

chr1:27216010-27216170

Target genes

Number: 18
Name	Ensembl ID

RPS6KA1	ENSG00000117676
Y	ENSG00000252802
RP4	ENSG00000235069
RP5	ENSG00000260063
ARID1A	ENSG00000117713
PIGV	ENSG00000060642
AL034380.1	ENSG00000241188
ZDHHC18	ENSG00000204160
SFN	ENSG00000175793
RP1	ENSG00000226698
GPN2	ENSG00000142751
NUDC	ENSG00000090273
GPATCH3	ENSG00000198746
RP11	ENSG00000172746
OSTCP2	ENSG00000225294
TRNP1	ENSG00000253368
FAM46B	ENSG00000158246
SLC9A1	ENSG00000090020

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr1:27216101-27216115	ATGGGGGCGTGGCG	-	6
KLF16	MA0741.1	chr1:27216103-27216114	GGGGGCGTGGC	-	6.62
SP1	MA0079.4	chr1:27216102-27216117	TGGGGGCGTGGCGTC	-	6.04
SP3	MA0746.2	chr1:27216102-27216115	TGGGGGCGTGGCG	-	6.57
SP4	MA0685.1	chr1:27216100-27216117	CATGGGGGCGTGGCGTC	-	6.13
SP8	MA0747.1	chr1:27216102-27216114	TGGGGGCGTGGC	-	6.11

Enhancer Sequence

AACACCACAC AGCCAGTCAG TAGCAGAGCC AGATTCTGAA CTCATGCCTG TTTTACTCCA 60
AAGCGACCCA GCCCCTACCT CCCTGTGTGA CATGGGGGCG TGGCGTCTGT CCTCCCTGTC 120
TCAGTTACTC CATCCGCAAA ATGGGCCTCC CCGCCCTGAG 160