| Tag | Content |
|---|
EnhancerAtlas ID | HS110-02902 |
Organism | Homo sapiens |
Tissue/cell | KATO3 |
Coordinate | chr2:238397230-238399000 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr2:238398971-238398992 | AAAAAAAAAAAGAAAGAAAAC | - | 6.33 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_02276 | chr2:238394319-238399153 | Astrocytes | | SE_23319 | chr2:238394888-238399460 | Colon_Crypt_1 | | SE_24038 | chr2:238396841-238399141 | Colon_Crypt_2 | | SE_31456 | chr2:238394883-238399287 | Gastric | | SE_41794 | chr2:238395518-238398991 | LNCaP | | SE_42591 | chr2:238394833-238399267 | Lung | | SE_43408 | chr2:238393686-238401070 | MCF-7 | | SE_45533 | chr2:238393921-238399658 | Osteoblasts | | SE_55655 | chr2:238393536-238399103 | u87 | | SE_57791 | chr2:238397381-238399075 | VACO_503 | | SE_67451 | chr2:238393536-238399103 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr2 | 238398088 | 238398461 | | chr2 | 238398495 | 238398552 | | chr2 | 238398617 | 238398839 |
|
Enhancer Sequence | GCCCTCACTC AGGCTCTAAG AACAGTAGCA GGTGCCTCAG AGGATTGACT GAGGACACAT 60
TTAGAGAACA TGGGATGGTG CCCGGCACAC ACATGGGGAG TCAGTGGGTC TTACTGAGTA 120
CGACATGAGT GACTCAGAAA AAAATTAAAA CAAACCAGCT GAATGTGTGC CCAGTGAGGG 180
GCTGGAGGTG GTGGAAGTGT CCCAGAGCCC TGTGGGCTAA TGGGAAAAGT GAAATTGGTG 240
CCTTTCAACC ACAATGCAAT AACGGCTCAA ATAAGCCCCA GTCTCAGTGG TTGGGGCAGC 300
CTTCTAGGGC CAACTGTCTT GTTCTTTTCA GAAGCAACCT CTGGAGGAAC AGTCTTTGCC 360
CCTACTCCTC CCCACTACCC CCACACCATC ACTCCCCCTC TTAATTTCAA CATCCTGGCA 420
TCATCCAGGG CTGGAGAGGG CCAGAGAGGT CTTGGAGCTC AGCCATTGTC CATGGTACAG 480
ATGGGGAAAC TAAGACCCTG AGAGGAGGGG CATCTTTCCC AGGTGGCTGG GCTGGCTGTG 540
CCTGAACTGG GATGGGAACC CAGCTCCCAC CTCTCAGCAC CATCCTCCTA CAGCCTCACC 600
TGGGACCCAT CCTTGCGGTA GAGACTAGCA CTGAGGCTTT AGGTGTAAAT GCAGAACTCA 660
TGTCCATTTA TAAATGAGGT TTACCACCAA CTCCCCAGAG AACTGGGAGA GCAGAGGGGA 720
TGGCAAGTTG GTGGGCAGGT GGCTGAGGGG CAGAACACCC TCCCAGTGCT GTTGCTGCTG 780
GGGCCATTCC AGACCCTTGT GGCTACAGCA CAGATGTGCC TGGTTCACTT GTAGGGAAGG 840
GAGTGGCCCT TCTAGGTGGA AATGTGCTCA TTTAGCCACT GATGAGAGCT GGGGGTCAGT 900
GCCTACTGAT GGGCCCCACC TATAGAAATA ACCATACAGG CTGACCTGGA CGGCAGCATT 960
CGGGAAACAG CCACAAAGGA TTAAGGCAGA GGGCACTACA GTTGTCATCT CTGCCACCTC 1020
CCCTTTATCA GCAAGAATAA CACCACACGA CACACCTTGG CTCTGAGTCA GAGAGAGCAT 1080
TCCTGCTGTT GTTAGCTTGC CAGTTTGTTT GCCCAGGCGA GTAATCACCC ACAATCACCA 1140
TTGTTCCAAG GCTCCCCAAG CAGCCAGCCC AAGAGCTAGT TAAGCCAATT CTTCATCCAG 1200
GAGGAACCCC CACCCTGATT TCCCTTCAAT TTGGCCAAAA AATTAATTCA ACTCTTTAGC 1260
GGATAAAGAT GACACACTAC TGGAATTCAG CAGTCTGGGC CTGGGATACC CATCTTATAA 1320
AACCAGCTCC ACTCTCTCCT CCCTGCCTAT TAATCCCTGT GTCCCGTCCC TCTGCCCCAC 1380
TATGGCTATT CAACTGCTGG GGAAGGCTGG CTGTCTCCAA TGTTTAAAAT ATGATCGAAT 1440
CTGAGCAGTG GAACAGGCAG TAAGTGGAAG TGTTTTGTTC AGGAACCTCG TGAGCAGGCG 1500
TTATCTAAAC AGAAATGGAA CAAGGAGCAG ATAGAGCAGG GTGGCGTCTG CCCTCCCCCA 1560
GCACATACTC TGGGAGCCCC CACCCCACCC AGCTAGGGCA GGCACAGAGC AGCCCTGCAC 1620
TCCTCATGGG TCTAGCATAT TCTCTGCCCT CACCTCCCTG AGCCCATGGA GGTCGAGGCA 1680
GCAGTGAGCC ATGATTGCAC TATCGCACTG CAGCCTGAGC GACAGACCAG GACCTCATCT 1740
AAAAAAAAAA AAGAAAGAAA ACCATTTGAA 1770
|
